Gene
| Gene Model ID | pfu_aug2.0_571.1_04351 |
|---|---|
| Locus | scaffold571.1 : 156854 ... 177735 : - |
| To GenomeBrowser | scaffold571.1:156854..177735 |
| Genes list of scaffold | scaffold571.1 |
| Synonym | pfu_aug1.0_6452.1_60017 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_571.1_04351.t1 | 2 | 1 | RRM_1 | 4 | 66 | 3.6e-19 | 68.1 | 4.3e-13 | 7.1e-10 | 38.3 |
| pfu_aug2.0_571.1_04351.t1 | 2 | 1 | RRM_6 | 4 | 57 | 1.4e-15 | 56.9 | 2.0e-11 | 3.3e-08 | 33.3 |
| pfu_aug2.0_571.1_04351.t1 | 2 | 1 | RRM_5 | 21 | 71 | 1.0e-13 | 50.9 | 2.3e-06 | 0.0038 | 17.0 |
| pfu_aug2.0_571.1_04351.t1 | 2 | 2 | RRM_6 | 81 | 136 | 1.4e-15 | 56.9 | 1.6e-07 | 0.00027 | 20.8 |
| pfu_aug2.0_571.1_04351.t1 | 2 | 2 | RRM_1 | 83 | 143 | 3.6e-19 | 68.1 | 1.1e-09 | 1.8e-06 | 27.5 |
| pfu_aug2.0_571.1_04351.t1 | 2 | 2 | RRM_5 | 113 | 148 | 1.0e-13 | 50.9 | 7.5e-11 | 1.2e-07 | 31.4 |
| pfu_aug2.0_571.1_04351.t1 | 2 | 1 | KH_4 | 169 | 194 | 3.3e-06 | 26.6 | 2.6e-05 | 0.043 | 13.4 |
| pfu_aug2.0_571.1_04351.t1 | 2 | 1 | KH_2 | 172 | 205 | 1.0e-09 | 37.7 | 3.6e-06 | 0.0059 | 16.1 |
| pfu_aug2.0_571.1_04351.t1 | 4 | 1 | KH_1 | 173 | 234 | 4.8e-30 | 102.9 | 1.9e-17 | 3.1e-14 | 52.3 |
| pfu_aug2.0_571.1_04351.t1 | 4 | 1 | KH_3 | 181 | 222 | 1.9e-17 | 62.4 | 1.3e-11 | 2.1e-08 | 33.6 |
| pfu_aug2.0_571.1_04351.t1 | 4 | 2 | KH_1 | 258 | 276 | 4.8e-30 | 102.9 | 0.005 | 8.3 | 6.1 |
| pfu_aug2.0_571.1_04351.t1 | 4 | 2 | KH_3 | 258 | 265 | 1.9e-17 | 62.4 | 2.4 | 4000.0 | -2.4 |
| pfu_aug2.0_571.1_04351.t1 | 4 | 3 | KH_3 | 345 | 358 | 1.9e-17 | 62.4 | 0.35 | 580.0 | 0.3 |
| pfu_aug2.0_571.1_04351.t1 | 4 | 3 | KH_1 | 348 | 370 | 4.8e-30 | 102.9 | 0.055 | 91.0 | 2.8 |
| pfu_aug2.0_571.1_04351.t1 | 2 | 2 | KH_2 | 369 | 421 | 1.0e-09 | 37.7 | 3.7e-07 | 0.00061 | 19.2 |
| pfu_aug2.0_571.1_04351.t1 | 2 | 2 | KH_4 | 388 | 417 | 3.3e-06 | 26.6 | 0.00022 | 0.37 | 10.4 |
| pfu_aug2.0_571.1_04351.t1 | 4 | 4 | KH_1 | 391 | 433 | 4.8e-30 | 102.9 | 1.4e-13 | 2.3e-10 | 39.9 |
| pfu_aug2.0_571.1_04351.t1 | 4 | 4 | KH_3 | 398 | 433 | 1.9e-17 | 62.4 | 7.1e-12 | 1.2e-08 | 34.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_571.1_04351.t1 | gi|524880608|ref|XP_005096966.1| | PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_571.1_04351.t1 | gi|340722697|ref|XP_003399740.1| | PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1 isoform X1 [Bombus terrestris] | 0.0 |
| pfu_aug2.0_571.1_04351.t1 | gi|350424346|ref|XP_003493765.1| | PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1 isoform X1 [Bombus impatiens] | 0.0 |
| pfu_aug2.0_571.1_04351.t1 | gi|383858850|ref|XP_003704912.1| | PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1 isoform X1 [Megachile rotundata] | 0.0 |
| pfu_aug2.0_571.1_04351.t1 | gi|328787572|ref|XP_393878.3| | PREDICTED: IGF-II mRNA-binding protein isoform X4 [Apis mellifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_571.1_04351.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_571.1_04351.t1 atgtaccgtgtttatgtcggaaacttagacccggccgttgacgaaggaactcttcgtgggctttttgaggatcacggcat cgtggtagggaatattttaaagaaaagaaactacgcttttgtagattgtccagaccagaacaacgtagacaaggccatcg aaaaattgaatgattacgatcttctaggctcaaccatgcaagtggaaccttcaacatccagaaaaaggaaatccaacaaa atccagatccgtaatctgccgcagcacattaacagggacgatgtggagactctggtcatgggacttggtactctacagag atgtgaacaaggatcggagggattagtgtatgtgacttttgaaacacccgaagaagctcaaatggctgtaacaaacttga atggttatgattaccaggggcagatcctcaaggttgactttgctggtgcaggacagatgaaacgcagaccgcgacccaat aacaataactctgggatgaatcgacaggagttgccactgaggatcctggtcagcagtgagtttgtaggtgctatcattgg tcgacaaggacagactatacataatattacctcacagagccgagctagggttgatatacatagaagggacaacatttctg ctgacacacttgtaacaattaaaggaagccccgagagttgtacagaggcatgtaaggaaataatgaaagtagttgaagca gaggccaaatcattgaacaaaggtgtgtcggatatgaacaattattatgtagatcgagttataacagtttctggatcacc agataattgtgcgaaaggcgaggccctggtcacagaaaaaatgaggaagtgctttgaacaggacgcccagaattataatc aacagatgggtatgtttggaggaatgcccccaatgccaggaatgatgccccctgctatgtctggataccctggtatgaga caaccctaccaccctccgtcacttctgatactgccccagaagaatggagagatgaatggtgagaggaaaggaccctcccc acaactagatgaaaggaaggtcattataacaggctccgctgaagcccaatggaaggcgcagttctacattttcgacaaaa taaagatggagggaaactttcagaggttagaggaggttcacctcaggtcagaggtcatggtaccaaggagtatgattggt cgaatcataggcaaaggaggtcaaaatgtacgtgaaatgcagagagtcagtggtgctatagtgaagctaccagacccaaa caaccaaaacccgacagataacgacgaagtcgctgtggattttattgaattcactatgtgctattatgaatttgtggtaa aagagaacagcattaatggctcaagcttcagaatgtctatacaatactttgagaaatag |
|
Protein
| Protein ID | pfu_aug2.0_571.1_04351.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_571.1_04351.t1 MYRVYVGNLDPAVDEGTLRGLFEDHGIVVGNILKKRNYAFVDCPDQNNVDKAIEKLNDYDLLGSTMQVEPSTSRKRKSNK IQIRNLPQHINRDDVETLVMGLGTLQRCEQGSEGLVYVTFETPEEAQMAVTNLNGYDYQGQILKVDFAGAGQMKRRPRPN NNNSGMNRQELPLRILVSSEFVGAIIGRQGQTIHNITSQSRARVDIHRRDNISADTLVTIKGSPESCTEACKEIMKVVEA EAKSLNKGVSDMNNYYVDRVITVSGSPDNCAKGEALVTEKMRKCFEQDAQNYNQQMGMFGGMPPMPGMMPPAMSGYPGMR QPYHPPSLLILPQKNGEMNGERKGPSPQLDERKVIITGSAEAQWKAQFYIFDKIKMEGNFQRLEEVHLRSEVMVPRSMIG RIIGKGGQNVREMQRVSGAIVKLPDPNNQNPTDNDEVAVDFIEFTMCYYEFVVKENSINGSSFRMSIQYFEK |
|