Gene
| Gene Model ID | pfu_aug2.0_571.1_04356 |
|---|---|
| Locus | scaffold571.1 : 247665 ... 260954 : - |
| To GenomeBrowser | scaffold571.1:247665..260954 |
| Genes list of scaffold | scaffold571.1 |
| Synonym | pfu_aug1.0_8467.1_31582 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_571.1_04356.t1 | 1 | 1 | Fibrinogen_C | 86 | 268 | 6.7963e-43 | 146.9 | 0.0 | 9.40271e-43 | 146.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_571.1_04356.t1 | gi|260797357|ref|XP_002593669.1| | hypothetical protein BRAFLDRAFT_252169 [Branchiostoma floridae] | 6.0e-32 |
| pfu_aug2.0_571.1_04356.t1 | gi|548333232|ref|XP_005719470.1| | PREDICTED: fibrinogen-like protein 1-like [Pundamilia nyererei] | 7.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_571.1_04356.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_571.1_04356.t1 atgaagtggatatatcctttagtagcaaccttcattagattggcagagtgccagatcgtcatgcctattacgaagtgccc gatacttgaggagatagctagaatgaatgcggaaaagaacgttgacatgaaaaaggaaatggaagtacttaaaaaagagc aacgcggcctatcaaatggattatcatctcaaagaaattggatgaaggatgttatggttcaaagcaatgggattatggat tgcatgtggtacaagacaaggaattctgatgcacagagtggtgtgtataaccagatcgtaggggatagggacttcaaggc atattgtgacatggaaacagacggaggggggtggacggtcatagtatcacgagatccggggagttctattgatatgaata gatcatggcaggaatataaacatggctttggaaatgtagaaggatcattctactggattggaaatgacaatattcatgaa ttaaccaagcagaggccgtctgaggtttacattaaaatagaacatcaagcgaatgggttgaaatgggctaaatacacaaa catgacggtcctatcagaggaatacaagtacagattgtctttcgatgaaaattcatttgaaggatcaatggttgatatcc ttggaggagatggaaaccaggactggaatgtacagggcatggtcttcactacgtttgacaacgacaatgatggtaactgt gcaaccattaacaaagggggatggtggtacaacaactgtggctatagtatgaccaatcacacatttattatgggcttcga aaagagtgaactaagaccagacaacatgatgatgatccgctctaagaacccaaaataa |
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Protein
| Protein ID | pfu_aug2.0_571.1_04356.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_571.1_04356.t1 MKWIYPLVATFIRLAECQIVMPITKCPILEEIARMNAEKNVDMKKEMEVLKKEQRGLSNGLSSQRNWMKDVMVQSNGIMD CMWYKTRNSDAQSGVYNQIVGDRDFKAYCDMETDGGGWTVIVSRDPGSSIDMNRSWQEYKHGFGNVEGSFYWIGNDNIHE LTKQRPSEVYIKIEHQANGLKWAKYTNMTVLSEEYKYRLSFDENSFEGSMVDILGGDGNQDWNVQGMVFTTFDNDNDGNC ATINKGGWWYNNCGYSMTNHTFIMGFEKSELRPDNMMMIRSKNPK |
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