Gene
| Gene Model ID | pfu_aug2.0_5749.1_32823 |
|---|---|
| Locus | scaffold5749.1 : 5652 ... 12498 : + |
| To GenomeBrowser | scaffold5749.1:5652..12498 |
| Genes list of scaffold | scaffold5749.1 |
| Synonym | pfu_aug1.0_1371.1_36985 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5749.1_32823.t1 | 9 | 1 | zf-H2C2_2 | 59 | 69 | 2.2e-06 | 27.6 | 2.3 | 4300.0 | -1.7 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 1 | zf-C2H2 | 60 | 84 | 4.2e-14 | 51.9 | 0.005 | 9.3 | 6.8 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 1 | zf-C2H2_4 | 61 | 84 | 1.5e-09 | 37.5 | 0.0042 | 7.8 | 7.0 |
| pfu_aug2.0_5749.1_32823.t1 | 9 | 2 | zf-H2C2_2 | 78 | 98 | 2.2e-06 | 27.6 | 0.071 | 130.0 | 3.1 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 2 | zf-C2H2 | 89 | 112 | 4.2e-14 | 51.9 | 2.7e-05 | 0.051 | 13.9 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 2 | zf-C2H2_4 | 89 | 112 | 1.5e-09 | 37.5 | 5.4e-06 | 0.0099 | 16.1 |
| pfu_aug2.0_5749.1_32823.t1 | 9 | 3 | zf-H2C2_2 | 103 | 132 | 2.2e-06 | 27.6 | 5.5e-07 | 0.001 | 19.2 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 3 | zf-C2H2 | 121 | 143 | 4.2e-14 | 51.9 | 1.8e-06 | 0.0033 | 17.6 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 3 | zf-C2H2_4 | 121 | 143 | 1.5e-09 | 37.5 | 2.3e-06 | 0.0044 | 17.2 |
| pfu_aug2.0_5749.1_32823.t1 | 9 | 4 | zf-H2C2_2 | 139 | 156 | 2.2e-06 | 27.6 | 0.29 | 530.0 | 1.1 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 4 | zf-C2H2 | 149 | 170 | 4.2e-14 | 51.9 | 0.0002 | 0.37 | 11.2 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 4 | zf-C2H2_4 | 149 | 170 | 1.5e-09 | 37.5 | 0.0042 | 7.8 | 7.0 |
| pfu_aug2.0_5749.1_32823.t1 | 9 | 5 | zf-H2C2_2 | 162 | 188 | 2.2e-06 | 27.6 | 0.0032 | 5.9 | 7.3 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 5 | zf-C2H2 | 181 | 203 | 4.2e-14 | 51.9 | 0.035 | 65.0 | 4.1 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 5 | zf-C2H2_4 | 181 | 203 | 1.5e-09 | 37.5 | 0.0074 | 14.0 | 6.3 |
| pfu_aug2.0_5749.1_32823.t1 | 9 | 6 | zf-H2C2_2 | 195 | 219 | 2.2e-06 | 27.6 | 3.3e-06 | 0.0061 | 16.7 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 6 | zf-C2H2 | 209 | 231 | 4.2e-14 | 51.9 | 9.3e-08 | 0.00017 | 21.6 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 6 | zf-C2H2_4 | 209 | 231 | 1.5e-09 | 37.5 | 0.0012 | 2.3 | 8.7 |
| pfu_aug2.0_5749.1_32823.t1 | 9 | 7 | zf-H2C2_2 | 223 | 245 | 2.2e-06 | 27.6 | 3.0e-05 | 0.055 | 13.7 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 7 | zf-C2H2 | 236 | 254 | 4.2e-14 | 51.9 | 0.38 | 710.0 | 0.9 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 7 | zf-C2H2_4 | 236 | 247 | 1.5e-09 | 37.5 | 0.21 | 380.0 | 1.7 |
| pfu_aug2.0_5749.1_32823.t1 | 9 | 8 | zf-H2C2_2 | 261 | 281 | 2.2e-06 | 27.6 | 0.5 | 930.0 | 0.4 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 8 | zf-C2H2 | 272 | 293 | 4.2e-14 | 51.9 | 0.00016 | 0.3 | 11.5 |
| pfu_aug2.0_5749.1_32823.t1 | 8 | 8 | zf-C2H2_4 | 272 | 291 | 1.5e-09 | 37.5 | 0.0062 | 11.0 | 6.5 |
| pfu_aug2.0_5749.1_32823.t1 | 9 | 9 | zf-H2C2_2 | 284 | 295 | 2.2e-06 | 27.6 | 0.26 | 490.0 | 1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5749.1_32823.t1 | gi|752895005|ref|XP_011265704.1| | PREDICTED: zinc finger protein 135-like [Camponotus floridanus] | 2.0e-18 |
| pfu_aug2.0_5749.1_32823.t1 | gi|383856778|ref|XP_003703884.1| | 3.0e-18 | |
| pfu_aug2.0_5749.1_32823.t1 | gi|665802506|ref|XP_008549310.1| | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103572459 [Microplitis demolitor] | 6.0e-18 |
| pfu_aug2.0_5749.1_32823.t1 | gi|688551409|ref|XP_009299153.1| | PREDICTED: gastrula zinc finger protein XlCGF57.1-like [Danio rerio] | 6.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_5749.1_32823.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5749.1_32823.t1 atgactgaattccactatgtagaccctgactatggaggtgtgatggccaaagaactatacagacttcaacaagagaagaa actatgcgacactatcatacatgtggaggacagatttgccgatcataaatggaaagcccacggtgaaatatacagtccta agagatatcctgtgctgagctgtcctgaagagggatgtaacttcaagtctgtgaggaagacacatattacttcccataga aagatggtacacatgccgtgggaacatatatgtgagatctgtggtcaggcatcagggaacgcgacaaacctccgtgtcca catagagagggttcatcagaagctcaaaggagacctgaagttccagtgtcagttatgtcctaaaaagtttgcctctaaag gcagcctccatggccacatgaagttccacaataaagagttgttatgccatctctgctctaagtgctgtagtactaaaact gatctagcagtacatttgtatacaaatcatgacatagtgtcaccaaatctacgtttacgtcagtgtccacattgtgattt taagcattacagtagctgggcattcaagtcacatgtggcctcaaaacacggtggtaccaaagactttgtgtgtaaggaat gtggcaaggaattctatgcatcaaagaacctgtatgatcacatgaagatacacattggtaagaagtaccattgtccagtg gaggggtgtaccttcaccactatctataagtctgccctctatagatgtcatgtccctactgtacatacagaaaaggacat taagaacagcatgtgccacctgtgtgactatcgttgtaagaacaatcatgcattgaaaacacatatacgactaaaacaca acgtgaatctgacgggaccggagataaaacagatccaggcacggcttcacgcccctgtggtggaggaagggaccgttata ctgcctgctaggactaatcatgtacttgatgatctgacatcacagcagctagagacagacactgtgaatgtacctggtcc aatagatttactgttatcttga |
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Protein
| Protein ID | pfu_aug2.0_5749.1_32823.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5749.1_32823.t1 MTEFHYVDPDYGGVMAKELYRLQQEKKLCDTIIHVEDRFADHKWKAHGEIYSPKRYPVLSCPEEGCNFKSVRKTHITSHR KMVHMPWEHICEICGQASGNATNLRVHIERVHQKLKGDLKFQCQLCPKKFASKGSLHGHMKFHNKELLCHLCSKCCSTKT DLAVHLYTNHDIVSPNLRLRQCPHCDFKHYSSWAFKSHVASKHGGTKDFVCKECGKEFYASKNLYDHMKIHIGKKYHCPV EGCTFTTIYKSALYRCHVPTVHTEKDIKNSMCHLCDYRCKNNHALKTHIRLKHNVNLTGPEIKQIQARLHAPVVEEGTVI LPARTNHVLDDLTSQQLETDTVNVPGPIDLLLS |
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