Gene
| Gene Model ID | pfu_aug2.0_5774.1_16139 |
|---|---|
| Locus | scaffold5774.1 : 1 ... 15060 : + |
| To GenomeBrowser | scaffold5774.1:1..15060 |
| Genes list of scaffold | scaffold5774.1 |
| Synonym | pfu_aug1.0_7187.1_09507 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| elongation factor 1- somatic form | GO:0000003 GO:0000049 GO:0002119 GO:0003746 GO:0003924 GO:0005525 GO:0005615 GO:0005730 GO:0005829 GO:0005853 GO:0006355 GO:0006414 GO:0008340 GO:0009792 GO:0019901 GO:0030864 GO:0032587 GO:0040007 GO:0040011 GO:0044822 GO:0070062 GO:0071364 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5774.1_16139.t2 | 2 | 1 | GTP_EFTU | 9 | 60 | 9.4e-21 | 74.0 | 7.8e-20 | 2.3e-16 | 59.7 |
| pfu_aug2.0_5774.1_16139.t2 | 2 | 2 | GTP_EFTU | 61 | 134 | 9.4e-21 | 74.0 | 2.0e-05 | 0.06 | 12.7 |
| pfu_aug2.0_5774.1_16139.t2 | 2 | 1 | GTP_EFTU_D4 | 144 | 222 | 1.2e-10 | 40.9 | 2.5e-08 | 7.5e-05 | 22.2 |
| pfu_aug2.0_5774.1_16139.t2 | 2 | 1 | GTP_EFTU_D2 | 157 | 223 | 8.8e-35 | 118.6 | 2.3e-20 | 6.9e-17 | 61.3 |
| pfu_aug2.0_5774.1_16139.t2 | 3 | 1 | GTP_EFTU_D3 | 185 | 210 | 1.0e-36 | 125.0 | 2.7 | 7900.0 | -2.9 |
| pfu_aug2.0_5774.1_16139.t2 | 2 | 2 | GTP_EFTU_D2 | 289 | 355 | 8.8e-35 | 118.6 | 2.3e-20 | 6.9e-17 | 61.3 |
| pfu_aug2.0_5774.1_16139.t2 | 2 | 2 | GTP_EFTU_D4 | 292 | 354 | 1.2e-10 | 40.9 | 4.9e-07 | 0.0014 | 18.1 |
| pfu_aug2.0_5774.1_16139.t2 | 3 | 2 | GTP_EFTU_D3 | 317 | 342 | 1.0e-36 | 125.0 | 2.7 | 7900.0 | -2.9 |
| pfu_aug2.0_5774.1_16139.t2 | 3 | 3 | GTP_EFTU_D3 | 363 | 470 | 1.0e-36 | 125.0 | 9.79999e-40 | 2.9e-36 | 123.5 |
Transcript
| Transcript ID | pfu_aug2.0_5774.1_16139.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5774.1_16139.t1 atgggaaaaggttccttcaaatatgcctgggtattggacaaactgaaggcagagcgtgaacgtggtatcaccattgatat tgccctgtggaagtttgaaacaaccaaatactatgtaaccatcattgatgcccctggccacagagatttcatcaagaaca tgatcacaggtgaacggtttaatgaaatcaaaaaggaggtggaaacttatatcaaaaaggtcgggtacaatcctaaagca gtggcatttgtaccaatttctggatggcacggtgacaacatgcttgaagaatccgcaaatatgaaatggtctaaaggatg ggctattgagaggaaggaaggaaatgccagtggtaaaacaatgttcgaagctttggattccattttacctccccaaagac ctaccgataagcctcttcgactaccattacaggatgtttacaaaattggaggtattggaactgtacctgtcgggcgtgtt gagacaggtatactgaaaccaggaacggttgttaccttcgcccctgttaatgttaccactgaagttaagtctgttgagat gcaccatgaggccttaaccgaggctctacctggagataatgttggcttcaacgtgaaaaatgtgtcggtgaaagatatca agagaggaaatgttgctggagacagcaaaaatgatcccccgaaaggagctaaattgtttaatgcacagaaaaatggtgtt tatactccgccgggagcattcgtgtttcacaaacacaggctttattcaatattagactttgccaactcgcaggactttca gatctttgattttatgtcgcattcttctctgttctcgccttacagtcgtattggaactgtacctgtcgggcgtgttgaga caggtatactgaaaccaggaacggttgttaccttcgcccctgttaatgttaccactgaagttaagtctgttgagatgcac catgaggccttaaccgaggctctacctggagataatgttggcttcaacgtgaaaaatgtgtcggtgaaagatatcaagag aggaaatgttgctggagacagcaaaaatgatcccccgaaaggagctaaattgtttaatgcacaggtcattgtcctgaacc atcccggacagatacacaacggctacgcgcctgtccttgactgtcatactgcccacatcgcatgtaaattcgcggaaatc aaagaaaaggtggaccgtcgtagcggtaaaaaacttgaagacaaccccaaatttgtcaaatctggtgatgctgctatggt tgacatgattcctcagaaaccaatgtgtgtagaagcctttgcagagtacgccccacttgggcgttttgctgtccgtgaca tgagacagaccgtggctgtgggagtcattaaaagcgttgagaaacaagaggccactggtggtaaggtaaccaaagcagcc cagaaagctcagaacaagaagtga |
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| Transcript ID | pfu_aug2.0_5774.1_16139.t2 |
| Definition | - |
>pfu_aug2.0_5774.1_16139.t2 atgggaaaaggttccttcaaatatgcctgggtattggacaaactgaaggcagagcgtgaacgtggtatcaccattgatat tgccctgtggaagtttgaaacaaccaaatactatgtaaccatcattgatgcccctggccacagagatttcatcaagaaca tgatcacaggtgcttttcttatagaacggtttaatgaaatcaaaaaggaggtggaaacttatatcaaaaaggtcgggtac aatcctaaagcagtggcatttgtaccaatttctggatggcacggtgacaacatgcttgaagaatccgcaaatatgaaatg gtctaaaggatgggctattgagaggaaggaaggaaatgccagtggtaaaacaatgttcgaagctttggattccattttac ctccccaaagacctaccgataagcctcttcgactaccattacaggatgtttacaaaattggaggtattggaactgtacct gtcgggcgtgttgagacaggtatactgaaaccaggaacggttgttaccttcgcccctgttaatgttaccactgaagttaa gtctgttgagatgcaccatgaggccttaaccgaggctctacctggagataatgttggcttcaacgtgaaaaatgtgtcgg tgaaagatatcaagagaggaaatgttgctggagacagcaaaaatgatcccccgaaaggagctaaattgtttaatgcacag aaaaatggtgtttatactccgccgggagcattcgtgtttcacaaacacaggctttattcaatattagactttgccaactc gcaggactttcagatctttgattttatgtcgcattcttctctgttctcgccttacagtcgtattggaactgtacctgtcg ggcgtgttgagacaggtatactgaaaccaggaacggttgttaccttcgcccctgttaatgttaccactgaagttaagtct gttgagatgcaccatgaggccttaaccgaggctctacctggagataatgttggcttcaacgtgaaaaatgtgtcggtgaa agatatcaagagaggaaatgttgctggagacagcaaaaatgatcccccgaaaggagctaaattgtttaatgcacaggtca ttgtcctgaaccatcccggacagatacacaacggctacgcgcctgtccttgactgtcatactgcccacatcgcatgtaaa ttcgcggaaatcaaagaaaaggtggaccgtcgtagcggtaaaaaacttgaagacaaccccaaatttgtcaaatctggtga tgctgctatggttgacatgattcctcagaaaccaatgtgtgtagaagcctttgcagagtacgccccacttgggcgttttg ctgtccgtgacatgagacagaccgtggctgtgggagtcattaaaagcgttgagaaacaagaggccactggtggtaaggta accaaagcagcccagaaagctcagaacaagaagtga |
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Protein
| Protein ID | pfu_aug2.0_5774.1_16139.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5774.1_16139.t1 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYVTIIDAPGHRDFIKNMITGERFNEIKKEVETYIKKVGYNPKA VAFVPISGWHGDNMLEESANMKWSKGWAIERKEGNASGKTMFEALDSILPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRV ETGILKPGTVVTFAPVNVTTEVKSVEMHHEALTEALPGDNVGFNVKNVSVKDIKRGNVAGDSKNDPPKGAKLFNAQKNGV YTPPGAFVFHKHRLYSILDFANSQDFQIFDFMSHSSLFSPYSRIGTVPVGRVETGILKPGTVVTFAPVNVTTEVKSVEMH HEALTEALPGDNVGFNVKNVSVKDIKRGNVAGDSKNDPPKGAKLFNAQVIVLNHPGQIHNGYAPVLDCHTAHIACKFAEI KEKVDRRSGKKLEDNPKFVKSGDAAMVDMIPQKPMCVEAFAEYAPLGRFAVRDMRQTVAVGVIKSVEKQEATGGKVTKAA QKAQNKK |
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| Protein ID | pfu_aug2.0_5774.1_16139.t2 |
| Definition | - |
>pfu_aug2.0_5774.1_16139.t2 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYVTIIDAPGHRDFIKNMITGAFLIERFNEIKKEVETYIKKVGY NPKAVAFVPISGWHGDNMLEESANMKWSKGWAIERKEGNASGKTMFEALDSILPPQRPTDKPLRLPLQDVYKIGGIGTVP VGRVETGILKPGTVVTFAPVNVTTEVKSVEMHHEALTEALPGDNVGFNVKNVSVKDIKRGNVAGDSKNDPPKGAKLFNAQ KNGVYTPPGAFVFHKHRLYSILDFANSQDFQIFDFMSHSSLFSPYSRIGTVPVGRVETGILKPGTVVTFAPVNVTTEVKS VEMHHEALTEALPGDNVGFNVKNVSVKDIKRGNVAGDSKNDPPKGAKLFNAQVIVLNHPGQIHNGYAPVLDCHTAHIACK FAEIKEKVDRRSGKKLEDNPKFVKSGDAAMVDMIPQKPMCVEAFAEYAPLGRFAVRDMRQTVAVGVIKSVEKQEATGGKV TKAAQKAQNKK |
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