Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_579.1_30935
Locus scaffold579.1 : 61332 ... 121665 : -
To GenomeBrowser scaffold579.1:61332..121665
Genes list of scaffold scaffold579.1
Synonym pfu_aug1.0_10208.1_46163

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_579.1_30935.t1 2 1 SET 469 519 1.2e-25 90.6 1.0 2200.0 -1.2
pfu_aug2.0_579.1_30935.t1 3 1 Pre-SET 1013 1040 5.6e-19 68.3 7.0 15000.0 -6.3
pfu_aug2.0_579.1_30935.t1 5 1 Ank_4 1153 1199 5.1e-33 112.8 1.2e-07 0.00026 21.4
pfu_aug2.0_579.1_30935.t1 3 1 Ank_2 1153 1242 2.94273e-44 149.2 8.4e-19 1.8e-15 57.0
pfu_aug2.0_579.1_30935.t1 7 1 Ank 1154 1172 5.4e-40 133.2 3.3 7000.0 -2.9
pfu_aug2.0_579.1_30935.t1 4 1 Ank_5 1165 1220 5.1e-34 115.5 1.4e-08 2.9e-05 24.1
pfu_aug2.0_579.1_30935.t1 7 2 Ank 1179 1211 5.4e-40 133.2 9.0e-09 1.9e-05 24.2
pfu_aug2.0_579.1_30935.t1 6 1 Ank_3 1179 1204 3.6e-29 97.8 9.3e-06 0.02 15.1
pfu_aug2.0_579.1_30935.t1 5 2 Ank_4 1182 1233 5.1e-33 112.8 1.9e-10 4.0e-07 30.3
pfu_aug2.0_579.1_30935.t1 4 2 Ank_5 1206 1233 5.1e-34 115.5 9.7e-06 0.021 15.0
pfu_aug2.0_579.1_30935.t1 7 3 Ank 1215 1240 5.4e-40 133.2 8.6e-09 1.8e-05 24.2
pfu_aug2.0_579.1_30935.t1 6 2 Ank_3 1215 1239 3.6e-29 97.8 1.5e-06 0.0032 17.5
pfu_aug2.0_579.1_30935.t1 3 2 Ank_2 1227 1310 2.94273e-44 149.2 4.9e-20 1.0e-16 61.0
pfu_aug2.0_579.1_30935.t1 4 3 Ank_5 1232 1287 5.1e-34 115.5 5.6e-13 1.2e-09 38.0
pfu_aug2.0_579.1_30935.t1 7 4 Ank 1245 1278 5.4e-40 133.2 1.8e-08 3.9e-05 23.2
pfu_aug2.0_579.1_30935.t1 6 3 Ank_3 1245 1274 3.6e-29 97.8 2.9e-06 0.0061 16.6
pfu_aug2.0_579.1_30935.t1 5 3 Ank_4 1246 1300 5.1e-33 112.8 6.8e-12 1.4e-08 34.9
pfu_aug2.0_579.1_30935.t1 7 5 Ank 1280 1311 5.4e-40 133.2 1.3e-09 2.8e-06 26.8
pfu_aug2.0_579.1_30935.t1 6 4 Ank_3 1280 1307 3.6e-29 97.8 3.9e-06 0.0083 16.2
pfu_aug2.0_579.1_30935.t1 5 4 Ank_4 1295 1333 5.1e-33 112.8 4.0e-10 8.6e-07 29.3
pfu_aug2.0_579.1_30935.t1 4 4 Ank_5 1299 1353 5.1e-34 115.5 1.8e-15 3.7e-12 46.0
pfu_aug2.0_579.1_30935.t1 3 3 Ank_2 1314 1362 2.94273e-44 149.2 3.0e-12 6.4e-09 36.0
pfu_aug2.0_579.1_30935.t1 7 6 Ank 1314 1340 5.4e-40 133.2 1.6e-07 0.00035 20.2
pfu_aug2.0_579.1_30935.t1 5 5 Ank_4 1314 1362 5.1e-33 112.8 2.5e-10 5.3e-07 29.9
pfu_aug2.0_579.1_30935.t1 6 5 Ank_3 1314 1340 3.6e-29 97.8 1.0e-06 0.0022 18.0
pfu_aug2.0_579.1_30935.t1 7 7 Ank 1345 1362 5.4e-40 133.2 0.00059 1.3 9.0
pfu_aug2.0_579.1_30935.t1 6 6 Ank_3 1345 1362 3.6e-29 97.8 0.0016 3.4 8.1
pfu_aug2.0_579.1_30935.t1 3 2 Pre-SET 1374 1479 5.6e-19 68.3 2.7e-22 5.6e-19 68.3
pfu_aug2.0_579.1_30935.t1 2 2 SET 1498 1604 1.2e-25 90.6 1.3e-28 2.8e-25 89.5
pfu_aug2.0_579.1_30935.t1 3 3 Pre-SET 1616 1625 5.6e-19 68.3 2.3 4900.0 -2.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_579.1_30935.t1 gi|524883368|ref|XP_005098316.1| PREDICTED: uncharacterized protein LOC101856179 [Aplysia californica] 0.0
pfu_aug2.0_579.1_30935.t1 gi|705684879|ref|XP_010120058.1| PREDICTED: histone-lysine N-methyltransferase EHMT1, partial [Chlamydotis macqueenii] 0.0
pfu_aug2.0_579.1_30935.t1 gi|148694781|gb|EDL26728.1| euchromatic histone lysine N-methyltransferase 2, isoform CRA_e [Mus musculus] 0.0
pfu_aug2.0_579.1_30935.t1 gi|695166279|ref|XP_009511633.1| PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase EHMT1-like, partial [Phalacrocorax carbo] 0.0
pfu_aug2.0_579.1_30935.t1 gi|3986768|gb|AAC84164.1| G9A [Mus musculus] 0.0

Transcript
Transcript IDpfu_aug2.0_579.1_30935.t1
Definition-
>pfu_aug2.0_579.1_30935.t1
atggttttgactcttgaggttgaggaatgggatggtgaagctcctgagctgagtaaagagatagccgccatggagacaaa
cttagataacggtcatgttgccatggtaaccaatggtaaaagtgaagaaaatgggtcatcttccttcacacagctgaagg
ctgtaaaagatatagaaaaagacaattctagtcagaaagaagccgaaatttgtgacaaaacacccatagtaaatggtgtg
ataaaagatagcgtgtctgaaaaaaattcagtacttaatcagaaaacaattgtatttaaaagtggtgaaactgcaatcac
aaatggttttagaaatgaaaatgatttgaaagaaaatgataatgcaaatattgatgatgaaaataatgaagcaattttgc
ctgaaatagaaggaggaagtgagaaagagactacatcagaggtcaaatctggtgtaactagtgaatgttcagatagtatt
ggtaataatgacaaggaaaatactgttgaatcaagggagtgtactcctcttagtgatataagtgtgaattccagtgtgtc
aagaagccgaacgcctgtgaatgcagaaaatagcacaaacgatgtgacaancttccttcacacagctgaaggcttactta
atcagaaaacaattgtatttaaaagtggtgaaactgcaatcacaaatggttttagaaatgaaaatgacttgaaagaaaat
gataatgcaaatattgatgatgaaaataatgaagcaattttgcctgaaatagagggaagaagagagaaagagactacatc
agaggttaaatctggtttaactagtgaatgtttagatagtattggtaataatgacaaggaaaatactgttgaatcaaggg
agtgtactcctcttagtgatataagtgtgaattccagtgtgtcaagaagccgtacgcctgtgaatgcagaaaatagcaca
aacgatgtgacaatggtgtcaaaagttgaaagatctacagtcatatcgcggagttctgaagaaagatccaatgactcatt
agatagtacattatgtagcggtgaaagtactgtatcatctttaagtgtgaaatcctcagggccatttaagaaaggcgtac
caagggcacgtaaatctggtccgactgtgtccaagagtagccttccttcagcagccaaaccgagcacagaatctcccgtt
aaaaatgtgactctgaacttgccagatttcgataatccaattcgaatagattccaaaatgctggataaaataagtaagct
gggaaaagttaatcaagaaagagaaggaaggaaagtaaaaagaacttctctacccttgaaggtagaacctcaatcatcgc
ctgtgataccggaaggattagacggacatttctctgattcttcgctattagaaaaagacgcttttggtaaagttaaaaaa
cggaaaagaaagagggcaaggttaggtacttataaactgccaaatgagcttaaaaagaaatcatcgctgaagaagaaaga
cagtgacaatgataaaaaagaggattcagaatcaaaaagaacagaaggatcttcagacgctagtgttaaagtgaaaaatg
gttcgatagtttccccaatcagtaaaacttctaacgaaaaaagtcccataggaaagtcagacgcctcttccccgaggtct
gcctttgatgtactgaaacatgccaggattacacctcgtaccaaaaacacgctaggaagcactcggcatagaatgggaag
tgggaaaagtaaagcacagagttctctagatgcattccttaacttggcagatcctaaaactagtccaggaattaagcagg
agatgcttgtagaagaaacagaagatgctgacaacggtacaagaagggcggggcttcgtaaaaggaaaaaagaagatgat
gattctgatgaaagcagtggtgtcaacaaggagacagatagcagcaatgttaaaagaaagagaaagccattagaaacatc
ccaaatcatttctacaaaagaagaaaagaacgtagaaccaccaacagcacctgtgtcctgtaccccactcggacacaaat
ctatagttccaacaaccgtgcagagcgcaacactaagcactcctacaactcttaacaatatagctcaaaccaaaagcctg
ccgatgataagtttgttacacggaggtatgagacctggcaccaccattctacaaacacagaatccaatggctaccggcat
tgttaccggctctcacgctccgttgatcttagttccagttaatagtacttctccggtaaatgccataccattacctacct
cattgtctaatagtaaaacatcaccatctgccgctgctcaacccaaaatcatcttatcagtgcctgacccaaagatttcc
acgactgtagcagggtcaagcattcagcaagctccgcgcttcattctcatgacaaatgttggtcaaattccgccaaatgc
aaggatgcccagtgccacaccaatcatacaacccagaaacattgctcagcccaacatgatcaactctctggcagggatac
ccagacaacctggatgcccgctattgacaagtactagtattcaggaacttaaatcgtcagccacaaccgtcagttctagt
gctccagtacttagtaaaatattgaacagtagacttaatgcgcccaataatgatagattgttagatgaggaggagagggg
ggaatcccccaaccctgacagtatgacctatccagttactccgcccaaaactccggaagatcagcagagtgaagactcaa
gttctgttgcttcggctccatcaggacccatcccaccagacaaagatatcataccactgtgttcttgtaaaattaatggt
gcttcgtttaaaaagcttggtacaggtgttacttactgtcaagctctagattctgtagatggaaagataatgggatgttg
caataaagtgggaagttcacagctggtgcggccaggtgttaagataccgtttatgtctatttgtgaagcccacaggaaaa
ggctaagattacatcaatgttgtccaggatgtggccacttctgtacacagggcaagttttaccagtgcaagaagcccatg
gaaggtgtccctaatcatcgcctacctgttcactacttccacacccagtgccatgtgttaaggaatgggaggtaccactg
tcctcactgtggggaggagtctgaacagtacgaggtgaccttgaccctagacgaaccccgccctgtaacaaccaataaca
cagtggtagaagatcttcaaaagaaaactagtacaataagagccaaaatgggaattcatgccggtacatataggtctttc
ctgaaaccagaaaaagatccgacggaagatgaagtgacagccacttataaaataccaaagtctaatcgtaagccaccaaa
gttcttgtataatcctgcttatgagggagacatagaaagagttgcgttgatgttaagtgaaggtcacaaccctaacgagg
tagtagaggagtttgacaaccagacgcccctccatgctgcctgcttaggaggtcatatggccattgtacacatactggtt
cagatgggtgcttttatacatgccttggacaaagaattgaaaactccactaatgtacgcagctgaaagcaatcatatcca
aatcttcagatatctcgtcaaatgtaaagcaaatgtgtttcagaaggctgaggacggaatgactgtattacattacacag
caaaggcagggcatatagagataatgaagcttttactggacatggacaacatggatgttaatgtacaggatgatggaggc
tggacccctatcatatgggcttcagaacataaattagcctccgctgtcaggttccttataaaacatggtgctgatcctaa
ccttaaagataaggaggagaatacgagtttacattgggcggcgtattctggtagtgtggatattgctgagatgttcctga
atgctggctcagatctggaaacgccaaacgaacatggagataggccgctgcacatagctgcaagacaggatcactatgaa
tgtgttgtgattggtcgagtagataaattaatagacagagatgtgtcgcggggacgtgaaaatatacctatagctgtgat
aaatggtgtagatgatgatggggtgcctacagacttccagtacatcacggaaaacgtggagactgtggacctcaacatca
atagaactattactagtcttcagagctgccgatgcagtgacgactgttcttccatgtactgtgtatgcggcagaaatagt
atcaaatgttggtatgataagagttaccacctcctacctgacttcagtatgacggaacctccttttatatttgaatgtaa
cagaggctgtcgatgttggagcacctgtaataaccgtgtggttcaaaatggcattacgtgtagattccaaatgatgaaga
cggaaggtagaggctggggtgtgaaaactctgttagacattccgaaaggaacttttatatgcgaatacattggggagtta
atatcggactcggaggcagacagtcgggaagatgactcgtatctcttcgacttagacaatagggatggagacacgtattg
tatagatgctaggcgttacggtaacatagcgcgattcatcaaccatctctgtgaaccaaacatcattcctgttaaagtgt
ttgtggaccaccaagatctcagattccctcgtatttgtttcttttcgtctcgagatataaaagctgaagaagaattaggt
tttgactatggagaaaagttttggatcataaaatggaaacagtttacatgtgcttgtggttcacccaagtgtaaatactc
aaaggacacaatacagaggactctagaggagtataaattgagacacgaagatgaggagcccatagactga

Protein
Protein IDpfu_aug2.0_579.1_30935.t1
Definition-
>pfu_aug2.0_579.1_30935.t1
MVLTLEVEEWDGEAPELSKEIAAMETNLDNGHVAMVTNGKSEENGSSSFTQLKAVKDIEKDNSSQKEAEICDKTPIVNGV
IKDSVSEKNSVLNQKTIVFKSGETAITNGFRNENDLKENDNANIDDENNEAILPEIEGGSEKETTSEVKSGVTSECSDSI
GNNDKENTVESRECTPLSDISVNSSVSRSRTPVNAENSTNDVTXFLHTAEGLLNQKTIVFKSGETAITNGFRNENDLKEN
DNANIDDENNEAILPEIEGRREKETTSEVKSGLTSECLDSIGNNDKENTVESRECTPLSDISVNSSVSRSRTPVNAENST
NDVTMVSKVERSTVISRSSEERSNDSLDSTLCSGESTVSSLSVKSSGPFKKGVPRARKSGPTVSKSSLPSAAKPSTESPV
KNVTLNLPDFDNPIRIDSKMLDKISKLGKVNQEREGRKVKRTSLPLKVEPQSSPVIPEGLDGHFSDSSLLEKDAFGKVKK
RKRKRARLGTYKLPNELKKKSSLKKKDSDNDKKEDSESKRTEGSSDASVKVKNGSIVSPISKTSNEKSPIGKSDASSPRS
AFDVLKHARITPRTKNTLGSTRHRMGSGKSKAQSSLDAFLNLADPKTSPGIKQEMLVEETEDADNGTRRAGLRKRKKEDD
DSDESSGVNKETDSSNVKRKRKPLETSQIISTKEEKNVEPPTAPVSCTPLGHKSIVPTTVQSATLSTPTTLNNIAQTKSL
PMISLLHGGMRPGTTILQTQNPMATGIVTGSHAPLILVPVNSTSPVNAIPLPTSLSNSKTSPSAAAQPKIILSVPDPKIS
TTVAGSSIQQAPRFILMTNVGQIPPNARMPSATPIIQPRNIAQPNMINSLAGIPRQPGCPLLTSTSIQELKSSATTVSSS
APVLSKILNSRLNAPNNDRLLDEEERGESPNPDSMTYPVTPPKTPEDQQSEDSSSVASAPSGPIPPDKDIIPLCSCKING
ASFKKLGTGVTYCQALDSVDGKIMGCCNKVGSSQLVRPGVKIPFMSICEAHRKRLRLHQCCPGCGHFCTQGKFYQCKKPM
EGVPNHRLPVHYFHTQCHVLRNGRYHCPHCGEESEQYEVTLTLDEPRPVTTNNTVVEDLQKKTSTIRAKMGIHAGTYRSF
LKPEKDPTEDEVTATYKIPKSNRKPPKFLYNPAYEGDIERVALMLSEGHNPNEVVEEFDNQTPLHAACLGGHMAIVHILV
QMGAFIHALDKELKTPLMYAAESNHIQIFRYLVKCKANVFQKAEDGMTVLHYTAKAGHIEIMKLLLDMDNMDVNVQDDGG
WTPIIWASEHKLASAVRFLIKHGADPNLKDKEENTSLHWAAYSGSVDIAEMFLNAGSDLETPNEHGDRPLHIAARQDHYE
CVVIGRVDKLIDRDVSRGRENIPIAVINGVDDDGVPTDFQYITENVETVDLNINRTITSLQSCRCSDDCSSMYCVCGRNS
IKCWYDKSYHLLPDFSMTEPPFIFECNRGCRCWSTCNNRVVQNGITCRFQMMKTEGRGWGVKTLLDIPKGTFICEYIGEL
ISDSEADSREDDSYLFDLDNRDGDTYCIDARRYGNIARFINHLCEPNIIPVKVFVDHQDLRFPRICFFSSRDIKAEEELG
FDYGEKFWIIKWKQFTCACGSPKCKYSKDTIQRTLEEYKLRHEDEEPID

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495