Gene
| Gene Model ID | pfu_aug2.0_579.1_30939 |
|---|---|
| Locus | scaffold579.1 : 185670 ... 191594 : + |
| To GenomeBrowser | scaffold579.1:185670..191594 |
| Genes list of scaffold | scaffold579.1 |
| Synonym | pfu_aug1.0_19818.1_18673 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_579.1_30939.t1 | 2 | 1 | REC114-like | 23 | 113 | 4.3e-23 | 82.3 | 1.5e-13 | 1.1e-09 | 38.3 |
| pfu_aug2.0_579.1_30939.t1 | 2 | 2 | REC114-like | 132 | 206 | 4.3e-23 | 82.3 | 6.1e-15 | 4.5e-11 | 42.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_579.1_30939.t1 | gi|676493039|ref|XP_009066115.1| | hypothetical protein LOTGIDRAFT_236765 [Lottia gigantea] | 1.0e-34 |
| pfu_aug2.0_579.1_30939.t1 | gi|585713639|ref|XP_006825128.1| | PREDICTED: meiotic recombination protein REC114-like [Saccoglossus kowalevskii] | 4.0e-21 |
| pfu_aug2.0_579.1_30939.t1 | gi|573881765|ref|XP_006629074.1| | PREDICTED: meiotic recombination protein REC114-like [Lepisosteus oculatus] | 3.0e-17 |
| pfu_aug2.0_579.1_30939.t1 | gi|524878661|ref|XP_005096013.1| | PREDICTED: meiotic recombination protein REC114-like [Aplysia californica] | 4.0e-17 |
| pfu_aug2.0_579.1_30939.t1 | gi|602642577|ref|XP_007428076.1| | PREDICTED: meiotic recombination protein REC114-like [Python bivittatus] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_579.1_30939.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_579.1_30939.t1 atggataatcactggaaactttttcgatacgcaagacacagaagaagtgaagagttactagaaggcgaatgggagtattt cacatcgtcaaacaccaacccactggagctatgtattcagcacggcagcatcttattatcttacggcaagtccgtcatgg agtcgtatgctctatcaatgggtaaaacatgcttacgagctgtttgtaaaggagatagcatgctggtgatttacaagatg aaggacaagagccataaattccgaatgaagtttgacaaatcaaatggaaaatcagaagaagagaattgtagagaatgtgc ggaagtgatgtctaagtcattctcagtaaaggttgtaccaatcaaaccagtacatgaaacgaagcctatggattccgcat ccaaaacagcaaattcaactgttcttcaaggagatgtcactctgtcccagatagccgaggtcattgtagggaaaagtaca ggtatcagtctaccagagtgttatagaaatatctcagatttcaaggacgaagacataggaacttgtttaaagctttgtct tacagatcctttgttcccagcattcgttggaaaggttgaaaaagaacttgaaaaattaaaggaagaattctcttctcaat aa |
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Protein
| Protein ID | pfu_aug2.0_579.1_30939.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_579.1_30939.t1 MDNHWKLFRYARHRRSEELLEGEWEYFTSSNTNPLELCIQHGSILLSYGKSVMESYALSMGKTCLRAVCKGDSMLVIYKM KDKSHKFRMKFDKSNGKSEEENCRECAEVMSKSFSVKVVPIKPVHETKPMDSASKTANSTVLQGDVTLSQIAEVIVGKST GISLPECYRNISDFKDEDIGTCLKLCLTDPLFPAFVGKVEKELEKLKEEFSSQ |
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