Gene
| Gene Model ID | pfu_aug2.0_58.1_26755 |
|---|---|
| Locus | scaffold58.1 : 201735 ... 205026 : + |
| To GenomeBrowser | scaffold58.1:201735..205026 |
| Genes list of scaffold | scaffold58.1 |
| Synonym | pfu_aug1.0_1185.1_07826 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_58.1_26755.t1 | 2 | 1 | Condensation | 12 | 272 | 3.8e-19 | 68.6 | 1.0e-22 | 3.8e-19 | 68.6 |
| pfu_aug2.0_58.1_26755.t1 | 1 | 1 | AMP-binding | 442 | 843 | 0.0 | 191.9 | 0.0 | 0.0 | 191.5 |
| pfu_aug2.0_58.1_26755.t1 | 2 | 1 | AMP-binding_C | 744 | 756 | 5.1e-06 | 27.3 | 3.5 | 13000.0 | -2.8 |
| pfu_aug2.0_58.1_26755.t1 | 2 | 2 | AMP-binding_C | 851 | 931 | 5.1e-06 | 27.3 | 4.1e-09 | 1.5e-05 | 25.8 |
| pfu_aug2.0_58.1_26755.t1 | 2 | 2 | Condensation | 966 | 1018 | 3.8e-19 | 68.6 | 0.4 | 1500.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_58.1_26755.t1 | gi|676449880|ref|XP_009052197.1| | hypothetical protein LOTGIDRAFT_174606 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_58.1_26755.t1 | gi|503155880|ref|WP_013390541.1| | peptide synthetase [Bacillus atrophaeus] | 0.0 |
| pfu_aug2.0_58.1_26755.t1 | gi|734700068|ref|YP_009094951.1| | 0.0 | |
| pfu_aug2.0_58.1_26755.t1 | gi|255767429|ref|NP_389716.2| | 0.0 | |
| pfu_aug2.0_58.1_26755.t1 | gi|503136550|ref|WP_013371211.1| | bacitracin synthetase [Paenibacillus polymyxa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_58.1_26755.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26755.t1 atggaaacttcaagagctgcatcattaacgatggagacatcctggccattgaccctctcgcagcagagaatactgtttct tcagaaattgtcaccaaagtcgaatgcatacgtggataccatagttttgaggacagggaaagatgtgttaagtgacgaaa agatcagtcgtctgctaaatgcttatccgatattgtccacggttattttgagagacaaaagttctgaagaatatcgcctg cagtgtgctgatatagatgtaggaaagatccagaaagaacgagctcctacaggaatcttactgcaatcgtacatttcgga aacgatccctgtgtttgatgtaacgaagtgttcactagcttcttttcgatggattgaggacgggaccgatcatataacat ttatagcacatgttcaccaaatattatcttgtgtcttcgctttggataaactgcacaccattctggagaagcgtttgctc gcaaacgatgaaatgaacttggtaagctctgtctccatgtctcagtacgtagcagaagagaaacagtatcttgaatcaac tcagtatgaagttgataaagaattttggatgaagacattcaaagatgcaccttccgatgcaacaatttcactgagtcctt taaatgagcaaaacgatttagacaaacacaacgttaagactcggacgaaagaatttaggaattctgaaataatttcctct ccgcagtattttcacgttgataatgttccctattttctatcctgcctgaccatggtactacagcgctatcttggtacgga agacgtcacgatcgcagtcagacatgcacaaacttacacgctcttcccatttcgagttgatgtccaacagagtttcaacg aacacgttgctactgtttccacttcatgggaggatatacaactacatgcagatttcccttttcttcatttagctgatatc ttatggtcactacatgggaagtctttagaatcgttttgtgtagtagagctcgattttcaagaagtgaagaaatcaaagca tacactggtatgtatgccaaaccacgccagggtaccattacgaattcaaatcaacacgaattcggtgacggatgaaactt caatacaactacactgggcggacggatatgttgatgatggcattgccgaacgcttctttgacagcttattaaacctatgc ttcttgagacatgagaaaagaataaaagacattgctttcttgtcagcaaaggaaaccaaactattgaatctatatggaaa actacaaggcgtaacaatagaagataagcctatacactcatcgttcgaagactacgcatcaacaggtggagacaaagctg caattattatcgatgacaaatgtcatacatatgccgaaataaatgaaatttcgaatgatttggcagatgtgattacaaga gagaacgatacttccacaattaaggagaagcctgttgttttatttatggaaaaggaccaccttgctgtaagcgccatact agcagtatggaaaaccggtttatatttccttcctttatcgactactcacacaactacccttaaggaactggcagaaagtc agaccatttcgctgataatgcataacatggacatttccgaagatcttagatatttgttcaacacaaagggtgtaaaagca atagacgttcgaatgcctttcgatccgatggtcggggaacgtactcctcactcacagtttatggtttctgacatagctta tgctatcagaacatcaggctctactggacgtccaaaattatgcaagatatcacacaaaagtatcactatcatgtcgaaag cgtgggtaaatgcttgtagcctctcagctggatcaaggattcttcaatgggcacctctaagcttcgatgtcttcattggt gatcttgtcagagcattgatatcaatacaagggacactagttatatgtccggatgacagaagacttgatataccatatat ccatatattgattcacaagcatcaaataaccaatattgaattcactccacagtttgctttgaaagctgtggaatcggcga gttctgaaatacttgactcccttaaaagcttagtgattggatccgatgttactcaccggaatctattcttaaacataaag agtaaattgaagaatgatcaacgatttgtgcatggatatggaatgacagaagctacaatcgattctatctactttgaatc cgaggtaatacccttaacaagaagtgggacagttcctattggaaagccattacccggagtcggggcactcattcttgatt cagcaacgggtcttcgctgtccagttgggacgatcggcgagttgtatttatatggcgacaccattgcatcaggagatgta gtgtgcgatgaggtaaagattgatcatcaaacgacaataaaggcactgagaacaaaggaccagtgttgttggctgccttc aggagacatagaaatatacggtcgtttggacgatgttgtcaaaataagaggatttcgagtaagtcttacggagattgaga ataagattctgagttgtgttcaaacagctaaggaggtttccgtcttggtcattaaagatcaaaccgtaaaccatggcaag gattttcttgtggcgtatgttgttccagaatcaaaagatgctattgtcgacatgaatgcgatttgtaaagctcttgaagg agaacttccttactatatgattcccgacgcagtctgcccaatgcacaccataccaatgacattgaatggaaaggttaaca gaaagggtctcccttcgtttggggaaattttacagaggtcaaaatgtgacagcgcttttgcaatggaagcagaaaaggac gataactgtccagtaatacagaagctttttgcaaaggcattaggattgaccgatcacgagaaattaagccgtacagatac ctttatgaatcaaggaggccactccatgattttacttagctttcacggcttgattttacagaatacatcatacgaaatca ccgtaaaggacattttactacaccctactatcaatatgctagaaacgtacctacgaagcttataa |
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Protein
| Protein ID | pfu_aug2.0_58.1_26755.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26755.t1 METSRAASLTMETSWPLTLSQQRILFLQKLSPKSNAYVDTIVLRTGKDVLSDEKISRLLNAYPILSTVILRDKSSEEYRL QCADIDVGKIQKERAPTGILLQSYISETIPVFDVTKCSLASFRWIEDGTDHITFIAHVHQILSCVFALDKLHTILEKRLL ANDEMNLVSSVSMSQYVAEEKQYLESTQYEVDKEFWMKTFKDAPSDATISLSPLNEQNDLDKHNVKTRTKEFRNSEIISS PQYFHVDNVPYFLSCLTMVLQRYLGTEDVTIAVRHAQTYTLFPFRVDVQQSFNEHVATVSTSWEDIQLHADFPFLHLADI LWSLHGKSLESFCVVELDFQEVKKSKHTLVCMPNHARVPLRIQINTNSVTDETSIQLHWADGYVDDGIAERFFDSLLNLC FLRHEKRIKDIAFLSAKETKLLNLYGKLQGVTIEDKPIHSSFEDYASTGGDKAAIIIDDKCHTYAEINEISNDLADVITR ENDTSTIKEKPVVLFMEKDHLAVSAILAVWKTGLYFLPLSTTHTTTLKELAESQTISLIMHNMDISEDLRYLFNTKGVKA IDVRMPFDPMVGERTPHSQFMVSDIAYAIRTSGSTGRPKLCKISHKSITIMSKAWVNACSLSAGSRILQWAPLSFDVFIG DLVRALISIQGTLVICPDDRRLDIPYIHILIHKHQITNIEFTPQFALKAVESASSEILDSLKSLVIGSDVTHRNLFLNIK SKLKNDQRFVHGYGMTEATIDSIYFESEVIPLTRSGTVPIGKPLPGVGALILDSATGLRCPVGTIGELYLYGDTIASGDV VCDEVKIDHQTTIKALRTKDQCCWLPSGDIEIYGRLDDVVKIRGFRVSLTEIENKILSCVQTAKEVSVLVIKDQTVNHGK DFLVAYVVPESKDAIVDMNAICKALEGELPYYMIPDAVCPMHTIPMTLNGKVNRKGLPSFGEILQRSKCDSAFAMEAEKD DNCPVIQKLFAKALGLTDHEKLSRTDTFMNQGGHSMILLSFHGLILQNTSYEITVKDILLHPTINMLETYLRSL |
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