Gene
| Gene Model ID | pfu_aug2.0_58.1_26756 |
|---|---|
| Locus | scaffold58.1 : 213237 ... 216514 : - |
| To GenomeBrowser | scaffold58.1:213237..216514 |
| Genes list of scaffold | scaffold58.1 |
| Synonym | pfu_aug1.0_1185.1_07828 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_58.1_26756.t1 | 1 | 1 | Condensation | 2 | 265 | 1.8e-14 | 53.2 | 1.1e-17 | 3.1e-14 | 52.5 |
| pfu_aug2.0_58.1_26756.t1 | 2 | 1 | AMP-binding | 225 | 248 | 0.0 | 179.0 | 0.3 | 890.0 | -2.1 |
| pfu_aug2.0_58.1_26756.t1 | 2 | 2 | AMP-binding | 402 | 801 | 0.0 | 179.0 | 0.0 | 0.0 | 177.6 |
| pfu_aug2.0_58.1_26756.t1 | 2 | 1 | AMP-binding_C | 703 | 714 | 2.3e-06 | 28.4 | 0.91 | 2700.0 | -0.6 |
| pfu_aug2.0_58.1_26756.t1 | 2 | 2 | AMP-binding_C | 809 | 889 | 2.3e-06 | 28.4 | 6.2e-09 | 1.8e-05 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_58.1_26756.t1 | gi|503136565|ref|WP_013371226.1| | peptide synthetase [Paenibacillus polymyxa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_58.1_26756.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26756.t1 atggagaaatcatggccattgactctttctcaacagagatgtttgtatctacagaaagtgtctccgatgtcaagtgccta tgtagatacaatagcattcaagacaaaaaaggacatatcaagtgaagacatagtcaattgtctgctgacgactcatccga tattatcgacgaaaatttggaaagacgaacattctagcgaataccgtcaacgatgtgttaggtatcgagtagaaaggaaa atacccagagaacaagttcctgtctcgattccattacaatcttatatttcggaaacgattccagttttcaatttaaccaa cagctcgctagcttctttcagggttattgagtgcaagaatgatgttgtatttgttgctcacgttcaccaaattcttatct gtcttctcaaagtggatgaattgcaagcagcactggagaacattctatatggtcaattaccctactcggtaagcaatgtt acttacgctcagcatgtttcgcaagaccaactgtaccttgaatctgctcagtatgatgtcgacaaagaattctggatgaa aacttacagagctgcaccatccgatgcattgatttctctttctccatgtcatgttgaacaaaacttttccgacatacaca atgctaaaattctgctaaagcaatttcaaacttcgaagatagcttccttttcgaattatttccatgaatttggcgtgagt aatcttcactttttcctgtcttgcctgaccattgttctacagagataccttggtacagaggacgttacgatcgcagtaag acgtgaagaaacttacacgctcttcccatttcgagtcgatgtacaacagaatttcaacgatcacgtcgctgctgtttcta agtcttggaaagagatacagctacactcaaactttccttttcttcacctagcggacctattatggacactttacgggaag tctatagaatcattttgtgtattagagctcgattttaaggaggaaatgtcaaatcatgcactggtttgtatgccgaaaca tgcaagagttcctttgcgattgcagatcaacgcgaatctggtaactgatgaaacttctatacagctagaatgggcagacg aatatgtcgatgatggcattgctgaacgcttcttcgacagcttccagagtgtggcaatagaagagaaacccatacactca actttcgaggaatatgctacaaaagaaggcaataaagtagctgtcgtcgcccgggaaaagttcctcacctataaagaaat caatgaaatatctaacgacgttgctggtatgatcatagcagataccgaccttagcagaatcagggaaaggactgttctct tatttatggaaaaagaccaacacgcagctgtttggaaagttggtggatattttttgccactttctaccacacatgaaacc acgctaaaggaacttctacggagtcatccgatttcgctgatgatacataatgtggacatttctgaggatattgtcgacct gctttgtacaacagatataaaggcaatagacatgcgaaaacctttctcccataggaacgggagatgcaagattcgacggg cgctgagcgatcctatcttctctgatgtagcttatgctataagaacatccgggtctacaggacgtccaaaactatgcaag attacacacataggtctgaatgttctgtcaaaagcatgggtaaatgcttgtaatctttgtcatggagctagaattctgca atgggcacctctaagcttcgatgtctctatcggcgatctggttagagcactagtatcagtacaaggtacgctggttatat gcccggatgatcggaagctggatatcccatatatccattcaatgattcgcagacacgaaataacgaacgtcgaattcact ccacacttcgctctgagggtagtcgaaaatgacaattcaaaaatgttggactccctaaagtgtttagtcgttggttcaga tattgcgcatcaaaatctgtttcaaaacataaaaagtaaactgagacatgatcaaatacttgcaaacagctatggaatga cagaagctacaattgattccacatactttgaatccaaggaaattccaaggacgagaagtggaaccgttccaatcggaaaa cctttacccggagtcggggcactcattctcgattcagtaacgggtcttcgctgtccagttgggacgatcggtgagttgta tttatatggtgacaccattgcatcaggcgatgtagtatgcgatgaggtaaagattgatgatcaaatgacaataaaggcac tgagaacaaaggaccagtcatgttggctgccttcaggtgacatcgaattttacggtcgtctggacgacgttgtcaaaata agaggatttcgagtaagtcttacagagattgagaataagattctgagttgtgttcaaacagcaaaggaggtttccgtctt ggtcattaaagatcacacggtaaaccatggcaaggatttccttgtggcatatgttgtcccagaaccatataatgctgttg tagacagaggaataatctgtaaagctcttgaaggggatcttccatattatatgatcccagacttggtttgccagattgaa agcattcctatgacattaaacgggaaagtaaacaagaaaggacttccctcactgaaagaagttttacagaggacaaaatg taactctgcgagaacatcagaaaaggatgataaatgtacacaaatacagaagcttttcgcaaaggcattgggattggacc attacacgaacattagtcgtacagacaccttcatgaatcaaggaggccattctttggttttactttgctttcatggattg attgtacagaatacaccatacaagataaccataaaagacattttacatcaccctaccatcgatacgctggaagattacct acaaaggatgacatag |
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Protein
| Protein ID | pfu_aug2.0_58.1_26756.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26756.t1 MEKSWPLTLSQQRCLYLQKVSPMSSAYVDTIAFKTKKDISSEDIVNCLLTTHPILSTKIWKDEHSSEYRQRCVRYRVERK IPREQVPVSIPLQSYISETIPVFNLTNSSLASFRVIECKNDVVFVAHVHQILICLLKVDELQAALENILYGQLPYSVSNV TYAQHVSQDQLYLESAQYDVDKEFWMKTYRAAPSDALISLSPCHVEQNFSDIHNAKILLKQFQTSKIASFSNYFHEFGVS NLHFFLSCLTIVLQRYLGTEDVTIAVRREETYTLFPFRVDVQQNFNDHVAAVSKSWKEIQLHSNFPFLHLADLLWTLYGK SIESFCVLELDFKEEMSNHALVCMPKHARVPLRLQINANLVTDETSIQLEWADEYVDDGIAERFFDSFQSVAIEEKPIHS TFEEYATKEGNKVAVVAREKFLTYKEINEISNDVAGMIIADTDLSRIRERTVLLFMEKDQHAAVWKVGGYFLPLSTTHET TLKELLRSHPISLMIHNVDISEDIVDLLCTTDIKAIDMRKPFSHRNGRCKIRRALSDPIFSDVAYAIRTSGSTGRPKLCK ITHIGLNVLSKAWVNACNLCHGARILQWAPLSFDVSIGDLVRALVSVQGTLVICPDDRKLDIPYIHSMIRRHEITNVEFT PHFALRVVENDNSKMLDSLKCLVVGSDIAHQNLFQNIKSKLRHDQILANSYGMTEATIDSTYFESKEIPRTRSGTVPIGK PLPGVGALILDSVTGLRCPVGTIGELYLYGDTIASGDVVCDEVKIDDQMTIKALRTKDQSCWLPSGDIEFYGRLDDVVKI RGFRVSLTEIENKILSCVQTAKEVSVLVIKDHTVNHGKDFLVAYVVPEPYNAVVDRGIICKALEGDLPYYMIPDLVCQIE SIPMTLNGKVNKKGLPSLKEVLQRTKCNSARTSEKDDKCTQIQKLFAKALGLDHYTNISRTDTFMNQGGHSLVLLCFHGL IVQNTPYKITIKDILHHPTIDTLEDYLQRMT |
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