Gene
| Gene Model ID | pfu_aug2.0_58.1_26759 |
|---|---|
| Locus | scaffold58.1 : 289513 ... 308420 : - |
| To GenomeBrowser | scaffold58.1:289513..308420 |
| Genes list of scaffold | scaffold58.1 |
| Synonym | pfu_aug1.0_594.1_00408 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_58.1_26759.t1 | 1 | 1 | WH1 | 12 | 117 | 6.8e-12 | 45.0 | 1.5e-15 | 1.1e-11 | 44.3 |
| pfu_aug2.0_58.1_26759.t1 | 1 | 1 | Sprouty | 334 | 439 | 2.1e-35 | 121.0 | 4.8e-39 | 3.5e-35 | 120.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_58.1_26759.t1 | gi|676481674|ref|XP_009062454.1| | hypothetical protein LOTGIDRAFT_235185 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_58.1_26759.t1 | gi|568969755|ref|XP_006514520.1| | PREDICTED: sprouty-related, EVH1 domain-containing protein 2 isoform X2 [Mus musculus] | 0.0 |
| pfu_aug2.0_58.1_26759.t1 | gi|568969757|ref|XP_006514521.1| | PREDICTED: sprouty-related, EVH1 domain-containing protein 2 isoform X3 [Mus musculus] | 0.0 |
| pfu_aug2.0_58.1_26759.t1 | gi|568969753|ref|XP_006514519.1| | PREDICTED: sprouty-related, EVH1 domain-containing protein 2 isoform X1 [Mus musculus] | 0.0 |
| pfu_aug2.0_58.1_26759.t1 | gi|558120959|ref|XP_006114150.1| | PREDICTED: sprouty-related, EVH1 domain-containing protein 2 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_58.1_26759.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26759.t1 atgatagctgtgtgtttgcaaagtgacgaattcctggtccgagttcaagcccaggtgatgactcgggacgattccactgg gggctgggttccaatgggtgggggaggactaagcaatgttggcctcaggaaattggtgaaagccaacggagaggactacc ataatgaatatcttatatatggagaacgtatagcagacaaatcagttgtattagattgcttattaaagagagaccttaaa tatgtaaaggccaaccccaaatttcatcactggacaacagacgataaaaaatttggacttacgtttgagcgctgtgttga tgcgtcaaaatttgacaaaggcatccggagtgctgttgcagatctcgttgacggtaaaaacgaattgtgtccagaaggag acgaagaagtttttgcgatactgacgcttcctttatcatccagaggaacgtcttcctcgcagagtgcaagtaccacttca actacgacgagtagccccacagctcagtctcccacttctaatttctcaggagttccttcagaatatcatatcacaaatgc aaatcatcctcatgttcatcggattcagtacatctccagcacttcatcaccccatcatctaccatccacgcataaaaaac caccctctcctcccagtgataaaagtagttccggcaagtcggaaatagtagactctagtagttacggacaggacctttgg atcaaatcccccgatgatccaccatcgttaggttctaagtctgatcagggattgttagacgcccaatctgaagtggaact tcaagaatattcttacgttatttttgccaaaaataagcctcaaaaacctcatgaatatagttacccgactttagaggcag tgcaaaagcctccctccaaacgggaggctactagtaatgttaaacgtcaacctttaattcaacagactcaaccaccgtta cccaaaaagaaagggaaaaaacaaagattaataacaacaaaatctaggtgcaaacattgccatgaaatgttttcacatga agataattttagagggagttgtgaggacgcacctgatggtgtagagaagtgtatagagtatgtgacttgtgtatgttgta tgcggggcctgatataccactgtatgtcggaccctgatggggactacggccatccttgcaaatgtgaccccagtgataac tcaaactgtaaaaagtggactgctttaacaatcttgtcactatttgttccatgtttgtggtgctacttgccgctaatggc atgtcacaagtgtggtgtggcctgcagttgctgcggcggccgtcacaaagcggtctaa |
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Protein
| Protein ID | pfu_aug2.0_58.1_26759.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26759.t1 MIAVCLQSDEFLVRVQAQVMTRDDSTGGWVPMGGGGLSNVGLRKLVKANGEDYHNEYLIYGERIADKSVVLDCLLKRDLK YVKANPKFHHWTTDDKKFGLTFERCVDASKFDKGIRSAVADLVDGKNELCPEGDEEVFAILTLPLSSRGTSSSQSASTTS TTTSSPTAQSPTSNFSGVPSEYHITNANHPHVHRIQYISSTSSPHHLPSTHKKPPSPPSDKSSSGKSEIVDSSSYGQDLW IKSPDDPPSLGSKSDQGLLDAQSEVELQEYSYVIFAKNKPQKPHEYSYPTLEAVQKPPSKREATSNVKRQPLIQQTQPPL PKKKGKKQRLITTKSRCKHCHEMFSHEDNFRGSCEDAPDGVEKCIEYVTCVCCMRGLIYHCMSDPDGDYGHPCKCDPSDN SNCKKWTALTILSLFVPCLWCYLPLMACHKCGVACSCCGGRHKAV |
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