Gene
| Gene Model ID | pfu_aug2.0_58.1_26761 |
|---|---|
| Locus | scaffold58.1 : 425640 ... 437860 : - |
| To GenomeBrowser | scaffold58.1:425640..437860 |
| Genes list of scaffold | scaffold58.1 |
| Synonym | pfu_aug1.0_25425.1_19077 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_58.1_26761.t1 | 1 | 1 | Gal-bind_lectin | 120 | 245 | 4.8e-33 | 113.3 | 3.8e-37 | 5.7e-33 | 113.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_58.1_26761.t1 | gi|524971871|ref|XP_005085791.1| | PREDICTED: galectin-3 [Mesocricetus auratus] | 7.0e-26 |
| pfu_aug2.0_58.1_26761.t1 | gi|332842288|ref|XP_001148424.2| | PREDICTED: galectin-3 [Pan troglodytes] | 1.0e-25 |
| pfu_aug2.0_58.1_26761.t1 | gi|397523431|ref|XP_003831735.1| | PREDICTED: galectin-3 [Pan paniscus] | 1.0e-25 |
| pfu_aug2.0_58.1_26761.t1 | gi|674062028|ref|XP_008837760.1| | PREDICTED: galectin-3 isoform X2 [Nannospalax galili] | 3.0e-25 |
| pfu_aug2.0_58.1_26761.t1 | gi|674062026|ref|XP_008837759.1| | PREDICTED: galectin-3 isoform X1 [Nannospalax galili] | 3.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_58.1_26761.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26761.t1 atgcagtatcctcctcctggcggccatggtcctccaggtggatacggacctccaggtggatacggacaacccggtggata cggacagccaggtgcatacggacaacctggtgcatacggtcagccacaaggaggttacggacagccccctgggggctatg gaccaccgcctccgggtggatatggaccgccaggaggttaccctcccgctggagggtatgggggaccccctgatgccccc gtaggccctccacctgaggcccttgtgcacggaccgggaggcacttatggacagccacatggaccacctcccggccatca tggatatggaggtccaggcggtgaagttcaattaccctacaaaaattttatagctggaggtgtgaatactggacgatgga tcacggtttctggacgtcttacgggcgataattttcacgtgaatttggcggatcccagccccagtaatgatatcggattt catttcaacccgaggctcaatgagaatgctgtcgtaaggaacagcaagttaggtgggaattggggacatgaggagagggg aggcggcatgccattccatcctggacaacatttttccattggaatacaagttttggacagggaatacagggtcatggtta acaacaatcacttctgcagttttaatttccgagaacaccccggtgcatatagcgaattgcaggtcggtggagatctagcc aatgtccaaattcattttcagtga |
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Protein
| Protein ID | pfu_aug2.0_58.1_26761.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26761.t1 MQYPPPGGHGPPGGYGPPGGYGQPGGYGQPGAYGQPGAYGQPQGGYGQPPGGYGPPPPGGYGPPGGYPPAGGYGGPPDAP VGPPPEALVHGPGGTYGQPHGPPPGHHGYGGPGGEVQLPYKNFIAGGVNTGRWITVSGRLTGDNFHVNLADPSPSNDIGF HFNPRLNENAVVRNSKLGGNWGHEERGGGMPFHPGQHFSIGIQVLDREYRVMVNNNHFCSFNFREHPGAYSELQVGGDLA NVQIHFQ |
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