Gene
| Gene Model ID | pfu_aug2.0_58.1_26765 |
|---|---|
| Locus | scaffold58.1 : 507352 ... 515300 : - |
| To GenomeBrowser | scaffold58.1:507352..515300 |
| Genes list of scaffold | scaffold58.1 |
| Synonym | pfu_aug1.0_20536.1_62014 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_58.1_26765.t1 | 1 | 1 | ubiquitin | 17 | 72 | 2.4e-08 | 33.2 | 4.8e-12 | 3.6e-08 | 32.6 |
| pfu_aug2.0_58.1_26765.t1 | 1 | 1 | Ribosomal_S30 | 82 | 140 | 6.5e-29 | 99.4 | 1.2e-32 | 8.8e-29 | 99.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_58.1_26765.t1 | gi|71040625|dbj|BAE16016.1| | 0.0 | |
| pfu_aug2.0_58.1_26765.t1 | gi|226530702|ref|NP_001017866.2| | ubiquitin-like protein fubi and ribosomal protein S30 [Danio rerio] | 0.0 |
| pfu_aug2.0_58.1_26765.t1 | gi|156230884|gb|AAI52126.1| | Zgc:110695 protein [Danio rerio] | 0.0 |
| pfu_aug2.0_58.1_26765.t1 | gi|62205239|gb|AAH92983.1| | Zgc:110695 [Danio rerio] | 0.0 |
| pfu_aug2.0_58.1_26765.t1 | gi|209731142|gb|ACI66440.1| | Ubiquitin-like protein FUBI [Salmo salar] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_58.1_26765.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26765.t1 atggtgatctgcgtacggcgtaacaaaatgcagttgtttgttcgaggaagtcagattcacaccctccagattactggatc agaaactgtcgctgacgtcaagacatttctgtcagagaaggagggatatgcctgtgatgagcaggtagttatgttgggtg gtaaaccactacaggacgatatgctactcaacagctttgacgacctgtccacgttggacgtagatgtacgcatgctcgga ggtaaggtccacggatcattggctcgtgctggaaaggtcaagggtcagacacccaaggtggataaacaagagaagaagaa gtcaaagactggacgtgcaaagcgtcgcatgcagtacaacaggagatttggtgttgtcgtttctacgttcggacgcagga agggacctaatgccaactcttaa |
|
Protein
| Protein ID | pfu_aug2.0_58.1_26765.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26765.t1 MVICVRRNKMQLFVRGSQIHTLQITGSETVADVKTFLSEKEGYACDEQVVMLGGKPLQDDMLLNSFDDLSTLDVDVRMLG GKVHGSLARAGKVKGQTPKVDKQEKKKSKTGRAKRRMQYNRRFGVVVSTFGRRKGPNANS |
|