Gene
| Gene Model ID | pfu_aug2.0_58.1_26766 |
|---|---|
| Locus | scaffold58.1 : 522120 ... 551510 : - |
| To GenomeBrowser | scaffold58.1:522120..551510 |
| Genes list of scaffold | scaffold58.1 |
| Synonym | pfu_aug1.0_7354.1_09542 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_58.1_26766.t2 | 2 | 1 | EF-hand_7 | 13 | 70 | 7.8e-22 | 77.1 | 1.8e-09 | 1.7e-06 | 28.0 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 1 | EF-hand_6 | 13 | 40 | 3.5e-18 | 63.7 | 3.4e-08 | 3.3e-05 | 23.3 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 1 | EF-hand_1 | 14 | 38 | 1.4e-19 | 67.8 | 1.7e-07 | 0.00017 | 20.6 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 1 | EF-hand_8 | 14 | 32 | 1.3e-14 | 53.5 | 0.0062 | 6.2 | 6.5 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 1 | EF-hand_5 | 15 | 37 | 2.1e-11 | 42.5 | 2.5e-05 | 0.025 | 13.9 |
| pfu_aug2.0_58.1_26766.t2 | 2 | 1 | EF-hand_9 | 16 | 76 | 3.8e-06 | 26.7 | 0.0018 | 1.8 | 8.5 |
| pfu_aug2.0_58.1_26766.t2 | 2 | 2 | EF-hand_7 | 73 | 133 | 7.8e-22 | 77.1 | 2.4e-17 | 2.4e-14 | 53.2 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 2 | EF-hand_1 | 73 | 100 | 1.4e-19 | 67.8 | 4.6e-08 | 4.5e-05 | 22.4 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 2 | EF-hand_6 | 73 | 101 | 3.5e-18 | 63.7 | 1.7e-08 | 1.6e-05 | 24.3 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 2 | EF-hand_8 | 74 | 92 | 1.3e-14 | 53.5 | 0.0006 | 0.59 | 9.7 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 2 | EF-hand_5 | 74 | 88 | 2.1e-11 | 42.5 | 0.00012 | 0.12 | 11.7 |
| pfu_aug2.0_58.1_26766.t2 | 2 | 2 | EF-hand_9 | 76 | 134 | 3.8e-06 | 26.7 | 2.5e-06 | 0.0025 | 17.6 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 3 | EF-hand_8 | 88 | 134 | 1.3e-14 | 53.5 | 7.0e-14 | 6.9e-11 | 41.5 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 3 | EF-hand_1 | 108 | 135 | 1.4e-19 | 67.8 | 1.0e-09 | 1.0e-06 | 27.6 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 3 | EF-hand_6 | 109 | 134 | 3.5e-18 | 63.7 | 5.6e-06 | 0.0056 | 16.4 |
| pfu_aug2.0_58.1_26766.t2 | 3 | 3 | EF-hand_5 | 112 | 131 | 2.1e-11 | 42.5 | 3.8e-06 | 0.0038 | 16.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_58.1_26766.t2 | gi|704542855|ref|XP_010177239.1| | PREDICTED: calmodulin, striated muscle [Mesitornis unicolor] | 6.0e-27 |
| pfu_aug2.0_58.1_26766.t2 | gi|126165286|ref|NP_001075166.1| | calmodulin, striated muscle [Gallus gallus] | 2.0e-26 |
| pfu_aug2.0_58.1_26766.t2 | gi|699655402|ref|XP_009881278.1| | PREDICTED: calmodulin-like protein 5 [Charadrius vociferus] | 5.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_58.1_26766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26766.t1 atggcaaaagcagcatctgaagaagaaattgcagtgtacagggagttatttgactcctatgatgaggatagggatggtgt gataacagtagtagagcttgaaacactcctggacaccctcggacaacatgacagaaagtcttatctgataaaaattataa aggatatggaacaaaaaggaggtttgaaaattggtcagaaggaatatgagatgatgatgagagaagctttcaaagtgttt gataaggacggcaaaggacacattaagacagacaaactgaagtcagcatttaaaagtctgggaaaacaaatgtcaaagga ggaagtagacgaaataatgagagaaatagattttaatcaagatgggaccattaattacgaagaattccgtgatgcgtttc aaattctgaaatcgaacaagaaggacagactgactccacaggatctgaccaatggtctacgacatatgggccatgaacct tcagactctgacgtagaggaaattttggaagagttcgacaacttcgaactggagcaggcttttagagtatttgataagga cggggatgggtttatcaccaccgtagaactagggactgtgatgagatctctcggtataagtcctacacactccgagttag agggattgatcgatgaactagatgaggacggtacggagttgaaagtcggtattactggtaatggggtggtggattttcct gagtttatggcaatcgcagcgaagacaaaaaaggattccgacttcgatgtcagaataagagaggcattcaaggtttttga taaagacaacacggggagcattgatgttaacgacttccggaatctgatgacgaatctgggtgataaattcacggacgaag acgtagatgagataattcaggaagtgggattaacgccagatcggaagataacatgtgaagagtaccgtgcggccttccat tactttgataaagacggagatgggaggatcacagcgcaggagcttggtgccgtcttaaagaagatgggacaaaatctaac aaaagcagaaatcgcagacctaatcagcgaggtggatgtagacgcaagtggtgcaatagagttccatgaatttcttaaca tgatggcgaagcagcagtcccagtcacaacaagacaaggaaatcatggatgctttcaaagtatttgacaagaacggcgat ggcgtcatcagtgcgcaggaattacgtcaggtcatgggtcacatgggagagcgtctcagtgacaaagaagtagaaaagat gataagagaggcagatcaagatggcgacggacaaatcaattataatgcagataaagcagctagcaatttcacatttccgt gtaaaaagtattactccgacagtctcaaacgtgaattaggcatagatacattagaagtaatataa |
|
| Transcript ID | pfu_aug2.0_58.1_26766.t2 |
| Definition | - |
>pfu_aug2.0_58.1_26766.t2 atggcaaaagcagcatctgaagaagaaattgcagtgtacagggagttatttgactcctatgatgaggatagggatggtgt gataacagtagtagagcttgaaacactcctggacaccctcggacaacatgacagaaagtcttatctgataaaaattataa aggatatggaacaaaaaggaggtttgaaaattggtcagaaggaatatgagatgatgatgagagaagctttcaaagtgttt gataaggacggcaaaggacacattaagacagacaaactgaagtcagcatttaaaagtctgggaaaacaaatgtcaaagga ggaagtagacgaaataatgagagaaatagattttaatcaagatgggaccattaattacgaagatatagcaagagcgatga attcccattag |
|
Protein
| Protein ID | pfu_aug2.0_58.1_26766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26766.t1 MAKAASEEEIAVYRELFDSYDEDRDGVITVVELETLLDTLGQHDRKSYLIKIIKDMEQKGGLKIGQKEYEMMMREAFKVF DKDGKGHIKTDKLKSAFKSLGKQMSKEEVDEIMREIDFNQDGTINYEEFRDAFQILKSNKKDRLTPQDLTNGLRHMGHEP SDSDVEEILEEFDNFELEQAFRVFDKDGDGFITTVELGTVMRSLGISPTHSELEGLIDELDEDGTELKVGITGNGVVDFP EFMAIAAKTKKDSDFDVRIREAFKVFDKDNTGSIDVNDFRNLMTNLGDKFTDEDVDEIIQEVGLTPDRKITCEEYRAAFH YFDKDGDGRITAQELGAVLKKMGQNLTKAEIADLISEVDVDASGAIEFHEFLNMMAKQQSQSQQDKEIMDAFKVFDKNGD GVISAQELRQVMGHMGERLSDKEVEKMIREADQDGDGQINYNADKAASNFTFPCKKYYSDSLKRELGIDTLEVI |
|
| Protein ID | pfu_aug2.0_58.1_26766.t2 |
| Definition | - |
>pfu_aug2.0_58.1_26766.t2 MAKAASEEEIAVYRELFDSYDEDRDGVITVVELETLLDTLGQHDRKSYLIKIIKDMEQKGGLKIGQKEYEMMMREAFKVF DKDGKGHIKTDKLKSAFKSLGKQMSKEEVDEIMREIDFNQDGTINYEDIARAMNSH |
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