Gene
| Gene Model ID | pfu_aug2.0_58.1_26767 |
|---|---|
| Locus | scaffold58.1 : 559447 ... 563740 : - |
| To GenomeBrowser | scaffold58.1:559447..563740 |
| Genes list of scaffold | scaffold58.1 |
| Synonym | pfu_aug1.0_973.1_36751 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_58.1_26767.t1 | 3 | 1 | EF-hand_8 | 2 | 39 | 6.3e-32 | 108.9 | 2.0e-13 | 2.0e-10 | 40.1 |
| pfu_aug2.0_58.1_26767.t1 | 2 | 1 | EF-hand_9 | 4 | 39 | 3.3e-10 | 39.7 | 1.8e-06 | 0.0018 | 18.1 |
| pfu_aug2.0_58.1_26767.t1 | 2 | 1 | EF-hand_7 | 6 | 37 | 3.0e-29 | 100.9 | 1.6e-08 | 1.6e-05 | 24.9 |
| pfu_aug2.0_58.1_26767.t1 | 2 | 1 | EF-hand_4 | 11 | 37 | 1.9e-07 | 30.7 | 0.0012 | 1.2 | 8.9 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 1 | EF-hand_1 | 12 | 39 | 7.1e-33 | 109.3 | 2.1e-12 | 2.1e-09 | 35.9 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 1 | EF-hand_5 | 13 | 37 | 3.8e-21 | 73.4 | 1.0e-07 | 0.0001 | 21.4 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 1 | EF-hand_6 | 13 | 39 | 6.2e-21 | 72.3 | 3.6e-06 | 0.0036 | 17.0 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 2 | EF-hand_8 | 46 | 66 | 6.3e-32 | 108.9 | 2.4e-05 | 0.023 | 14.2 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 2 | EF-hand_1 | 49 | 77 | 7.1e-33 | 109.3 | 3.0e-13 | 3.0e-10 | 38.6 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 2 | EF-hand_6 | 49 | 78 | 6.2e-21 | 72.3 | 7.8e-13 | 7.8e-10 | 37.8 |
| pfu_aug2.0_58.1_26767.t1 | 2 | 2 | EF-hand_7 | 50 | 110 | 3.0e-29 | 100.9 | 2.0e-24 | 2.0e-21 | 75.8 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 2 | EF-hand_5 | 50 | 74 | 3.8e-21 | 73.4 | 2.4e-10 | 2.3e-07 | 29.8 |
| pfu_aug2.0_58.1_26767.t1 | 2 | 2 | EF-hand_4 | 52 | 110 | 1.9e-07 | 30.7 | 2.4e-07 | 0.00024 | 20.8 |
| pfu_aug2.0_58.1_26767.t1 | 2 | 2 | EF-hand_9 | 53 | 111 | 3.3e-10 | 39.7 | 4.2e-07 | 0.00042 | 20.1 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 3 | EF-hand_8 | 62 | 112 | 6.3e-32 | 108.9 | 1.7e-20 | 1.7e-17 | 62.7 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 3 | EF-hand_1 | 85 | 112 | 7.1e-33 | 109.3 | 4.5e-13 | 4.5e-10 | 38.0 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 3 | EF-hand_5 | 89 | 110 | 3.8e-21 | 73.4 | 8.2e-08 | 8.2e-05 | 21.7 |
| pfu_aug2.0_58.1_26767.t1 | 3 | 3 | EF-hand_6 | 91 | 111 | 6.2e-21 | 72.3 | 5.7e-06 | 0.0057 | 16.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_58.1_26767.t1 | gi|156915032|gb|ABU97105.1| | calmodulin [Crassostrea gigas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_58.1_26767.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26767.t1 atgagatcattgggacagaatccgacagaggcagaattacaggacatgatcaatgaagtggatgctgatggaaatggcac cattgacttcccagaattcttaacgatgatggcaaagaaaatgaaggacgccgactcagaagaggaactcagagaagctt tcaaagtgttcgacaaagacggaaacggattcataagtgccgctgaattacgtcacgtgatgacgaatctcggagaaaaa ctcacagacgaggaggttgatgagatgatcagggaagctgatttagatggtgatggtcaagttaattatgaagaattcgt tcgtatgatgacgtcaaaatga |
|
Protein
| Protein ID | pfu_aug2.0_58.1_26767.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26767.t1 MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAKKMKDADSEEELREAFKVFDKDGNGFISAAELRHVMTNLGEK LTDEEVDEMIREADLDGDGQVNYEEFVRMMTSK |
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