Gene
| Gene Model ID | pfu_aug2.0_58.1_26768 |
|---|---|
| Locus | scaffold58.1 : 583957 ... 587660 : - |
| To GenomeBrowser | scaffold58.1:583957..587660 |
| Genes list of scaffold | scaffold58.1 |
| Synonym | pfu_aug1.0_150080.1_49932 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_58.1_26768.t1 | 3 | 1 | EF-hand_4 | 19 | 46 | 1.1e-09 | 37.9 | 0.12 | 86.0 | 2.9 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 1 | EF-hand_1 | 20 | 48 | 1.90016e-42 | 139.3 | 2.5e-12 | 1.8e-09 | 36.2 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 1 | EF-hand_6 | 20 | 49 | 1.6e-32 | 108.4 | 1.9e-12 | 1.3e-09 | 37.1 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 1 | EF-hand_8 | 20 | 46 | 2.6e-32 | 110.1 | 8.8e-05 | 0.062 | 12.9 |
| pfu_aug2.0_58.1_26768.t1 | 2 | 1 | SPARC_Ca_bdg | 21 | 78 | 1.7e-08 | 34.4 | 1.3e-05 | 0.0089 | 16.0 |
| pfu_aug2.0_58.1_26768.t1 | 2 | 1 | EF-hand_7 | 22 | 81 | 9.1e-38 | 128.2 | 2.7e-18 | 1.9e-15 | 56.7 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 1 | EF-hand_5 | 22 | 45 | 3.3e-26 | 89.4 | 1.3e-09 | 9.1e-07 | 27.9 |
| pfu_aug2.0_58.1_26768.t1 | 2 | 1 | EF-hand_9 | 24 | 83 | 4.3e-15 | 55.3 | 1.7e-11 | 1.2e-08 | 34.7 |
| pfu_aug2.0_58.1_26768.t1 | 3 | 2 | EF-hand_4 | 30 | 81 | 1.1e-09 | 37.9 | 1.9e-05 | 0.013 | 15.1 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 2 | EF-hand_8 | 33 | 83 | 2.6e-32 | 110.1 | 1.0e-15 | 7.1e-13 | 47.9 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 2 | EF-hand_1 | 56 | 83 | 1.90016e-42 | 139.3 | 2.2e-12 | 1.6e-09 | 36.3 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 2 | EF-hand_6 | 57 | 83 | 1.6e-32 | 108.4 | 4.1e-07 | 0.00029 | 20.4 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 2 | EF-hand_5 | 57 | 80 | 3.3e-26 | 89.4 | 3.3e-07 | 0.00024 | 20.3 |
| pfu_aug2.0_58.1_26768.t1 | 2 | 2 | SPARC_Ca_bdg | 89 | 152 | 1.7e-08 | 34.4 | 7.0e-06 | 0.0049 | 16.8 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 3 | EF-hand_8 | 90 | 110 | 2.6e-32 | 110.1 | 7.0e-05 | 0.05 | 13.2 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 3 | EF-hand_1 | 93 | 121 | 1.90016e-42 | 139.3 | 7.6e-13 | 5.4e-10 | 37.8 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 3 | EF-hand_6 | 93 | 122 | 1.6e-32 | 108.4 | 2.0e-12 | 1.4e-09 | 37.0 |
| pfu_aug2.0_58.1_26768.t1 | 2 | 2 | EF-hand_7 | 94 | 154 | 9.1e-38 | 128.2 | 7.5e-24 | 5.3e-21 | 74.5 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 3 | EF-hand_5 | 94 | 118 | 3.3e-26 | 89.4 | 5.9e-10 | 4.2e-07 | 29.0 |
| pfu_aug2.0_58.1_26768.t1 | 2 | 2 | EF-hand_9 | 97 | 155 | 4.3e-15 | 55.3 | 1.4e-06 | 0.00098 | 18.9 |
| pfu_aug2.0_58.1_26768.t1 | 3 | 3 | EF-hand_4 | 98 | 155 | 1.1e-09 | 37.9 | 1.8e-07 | 0.00013 | 21.6 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 4 | EF-hand_8 | 106 | 155 | 2.6e-32 | 110.1 | 2.0e-19 | 1.4e-16 | 59.8 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 4 | EF-hand_1 | 129 | 155 | 1.90016e-42 | 139.3 | 2.0e-12 | 1.4e-09 | 36.5 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 4 | EF-hand_5 | 133 | 154 | 3.3e-26 | 89.4 | 2.9e-06 | 0.002 | 17.3 |
| pfu_aug2.0_58.1_26768.t1 | 4 | 4 | EF-hand_6 | 135 | 155 | 1.6e-32 | 108.4 | 1.5e-05 | 0.01 | 15.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_58.1_26768.t1 | gi|700380052|ref|XP_009929788.1| | PREDICTED: calmodulin-A [Opisthocomus hoazin] | 0.0 |
| pfu_aug2.0_58.1_26768.t1 | gi|676478882|ref|XP_009061568.1| | hypothetical protein LOTGIDRAFT_219848 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_58.1_26768.t1 | gi|719730950|ref|XP_010210519.1| | PREDICTED: calmodulin [Tinamus guttatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_58.1_26768.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26768.t1 atgtcatccagattgaacatggatgctgtatctgttaattgtaataatatttattcagaattcaaagaagcattcagctt gtttgataaggatggagatgggacgattactaccaaagagcttgggactgtgatgagatcattgggacagaacccaacag aggcagaattacaggacatgatcaatgaagtggacgttgacgggaatggtacaatagacttttctgaatttctgtcgatg atgtcaagaaaaatgaaagaaacagacacagaagacgaactccgagaagctttcaaagtattcgacaaagacggcaacgg attcataagtgccgctgaattacgtcacgtaatgacgaatctcggagaaaaactcacagatgaggaggtggacgagatga tacgagaagctgatattgatggtgacggtcaagttaattatgatgaattcgttaaaatgatgaaaccaggccagaagtga |
|
Protein
| Protein ID | pfu_aug2.0_58.1_26768.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_58.1_26768.t1 MSSRLNMDAVSVNCNNIYSEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDVDGNGTIDFSEFLSM MSRKMKETDTEDELREAFKVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYDEFVKMMKPGQK |
|