Gene
| Gene Model ID | pfu_aug2.0_580.1_00909 |
|---|---|
| Locus | scaffold580.1 : 149626 ... 151211 : + |
| To GenomeBrowser | scaffold580.1:149626..151211 |
| Genes list of scaffold | scaffold580.1 |
| Synonym | pfu_aug1.0_320.1_50793 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| polypeptide n-acetylgalactosaminyltransferase 4 | GO:0005794 GO:0006486 GO:0016020 GO:0016740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_580.1_00909.t1 | 1 | 1 | Glyco_tranf_2_3 | 51 | 270 | 1.7e-07 | 31.2 | 1.9e-10 | 4.8e-07 | 29.8 |
| pfu_aug2.0_580.1_00909.t1 | 1 | 1 | Glycos_transf_2 | 53 | 237 | 3.6e-24 | 85.3 | 2.7e-27 | 6.6e-24 | 84.4 |
| pfu_aug2.0_580.1_00909.t1 | 1 | 1 | Glyco_tranf_2_2 | 83 | 269 | 4.0e-07 | 29.3 | 2.5e-10 | 6.1e-07 | 28.7 |
| pfu_aug2.0_580.1_00909.t1 | 1 | 1 | Glyco_transf_7C | 217 | 278 | 8.3e-12 | 44.4 | 7.6e-15 | 1.9e-11 | 43.2 |
| pfu_aug2.0_580.1_00909.t1 | 1 | 1 | Ricin_B_lectin | 367 | 466 | 1.5e-06 | 28.2 | 1.1e-09 | 2.6e-06 | 27.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_580.1_00909.t1 | gi|676484809|ref|XP_009063461.1| | hypothetical protein LOTGIDRAFT_64054, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_580.1_00909.t1 | gi|302565702|ref|NP_001181690.1| | polypeptide N-acetylgalactosaminyltransferase 4 [Macaca mulatta] | 0.0 |
| pfu_aug2.0_580.1_00909.t1 | gi|296212534|ref|XP_002752871.1| | PREDICTED: polypeptide N-acetylgalactosaminyltransferase 4 [Callithrix jacchus] | 0.0 |
| pfu_aug2.0_580.1_00909.t1 | gi|312087698|ref|XP_003145574.1| | glycosyl transferase [Loa loa] | 0.0 |
| pfu_aug2.0_580.1_00909.t1 | gi|402887191|ref|XP_003906986.1| | PREDICTED: polypeptide N-acetylgalactosaminyltransferase 4 [Papio anubis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_580.1_00909.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_580.1_00909.t1 atgatgagaattgacccaaactggaaggttacgcaggaacgatacttcgttaatatcacaaggagtaatgaaatcggcga caatcggacagtaccagacacgagacctccaggatgcagtagtgttccttataacattgaaatgcttccaactgcatcta tcgttatattgatgtatgaggaaccttggtcaacattgctaaggacgatacatagtgtactgaccaatactccgggtatt cttctaacagaactaattgttatagacgactatagtcaacacccggcattacagaaaccattggaaaggtacctggagca gctgactaaagttaaactcgccagatccaaagagaggcttggagtgatcaggggtagacaactagggttggatctagcta ccggtgacgtagttgtttatgtagactctcattgtgaggtgaatgttggctggttagaaccaatgttgtatgaaatcgcc aagaataatcacacagcgactgcacctatactcgattacatcaatccaatgtccttagaatacaagtctgtagggaattt tatgagagggggtatgatgtgggatttatcatacaaatacaccgatattccaccacatacgaagacgggattgttgccta tagattcatactctacaccggcgatatccggggggacattcgctattagtagaaaatatctacaagatttgggtggattt ccaaccagtatgaaagtctggggaggagaggacgtggagctatccattagggtatggttgtgcggaggaaggttactcaa ctgtccatgttctagagtcggtcatgtctttaagaatagccacgtgtataagatcaatcctcgagatgctaatgtaaaca ttgttcagatagcggagacttggttgggtccttataaagaacatttctacgccatcactgggggaacactaaaacagtcc catattacgtccatcagtgagtttgattccgtgaaatggacattcaaatgcaagacatttgattggtacattgagaacgt tttcccagaattagggaccccgcctctcggtgcgctttactttggcccacttggacttgacggattctgccttggtctag acagggacacctataacgtactgagtttatttaactgttttagttataagagtaagaattttgcgttgatgacatcagga gagctacgtttggacaactattgtgttgtccctgatactatgactatcaaactcagagattgtcacgattccagttatgc taaatggacttacgtggacaaaacattgagttttgacaacaatatttgtatagatgtacaaaacagggcatatctcaaaa taaggtcttgtgaacgaaaggaaaacatggcaaagtgggaatttcggtacaaacttacttatctttag |
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Protein
| Protein ID | pfu_aug2.0_580.1_00909.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_580.1_00909.t1 MMRIDPNWKVTQERYFVNITRSNEIGDNRTVPDTRPPGCSSVPYNIEMLPTASIVILMYEEPWSTLLRTIHSVLTNTPGI LLTELIVIDDYSQHPALQKPLERYLEQLTKVKLARSKERLGVIRGRQLGLDLATGDVVVYVDSHCEVNVGWLEPMLYEIA KNNHTATAPILDYINPMSLEYKSVGNFMRGGMMWDLSYKYTDIPPHTKTGLLPIDSYSTPAISGGTFAISRKYLQDLGGF PTSMKVWGGEDVELSIRVWLCGGRLLNCPCSRVGHVFKNSHVYKINPRDANVNIVQIAETWLGPYKEHFYAITGGTLKQS HITSISEFDSVKWTFKCKTFDWYIENVFPELGTPPLGALYFGPLGLDGFCLGLDRDTYNVLSLFNCFSYKSKNFALMTSG ELRLDNYCVVPDTMTIKLRDCHDSSYAKWTYVDKTLSFDNNICIDVQNRAYLKIRSCERKENMAKWEFRYKLTYL |
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