Gene
| Gene Model ID | pfu_aug2.0_581.1_04359 |
|---|---|
| Locus | scaffold581.1 : 70326 ... 74305 : + |
| To GenomeBrowser | scaffold581.1:70326..74305 |
| Genes list of scaffold | scaffold581.1 |
| Synonym | pfu_aug1.0_4424.1_30694 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_581.1_04359.t1 | 1 | 1 | OTU | 98 | 201 | 1.0e-06 | 29.3 | 6.4e-10 | 4.7e-06 | 27.1 |
| pfu_aug2.0_581.1_04359.t1 | 2 | 1 | MULE | 687 | 752 | 3.5e-09 | 36.6 | 2.3e-12 | 1.7e-08 | 34.5 |
| pfu_aug2.0_581.1_04359.t1 | 2 | 2 | MULE | 818 | 873 | 3.5e-09 | 36.6 | 0.37 | 2700.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_581.1_04359.t1 | gi|260786739|ref|XP_002588414.1| | hypothetical protein BRAFLDRAFT_63363 [Branchiostoma floridae] | 3.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_581.1_04359.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_581.1_04359.t1 atgggtacgccatacccttgcgcctcctgctgtagaaactgcacagaagataccatacagtgcgcttcatgtgagagatg ggtacaccgactacaacatgctgtgaatgcctctaccaaagacaggaaggctatccttgcttcagagtccatgctgctgt caacgtacgacgttcatctaccaagtgttgtatctagtatacctcctatgtgcactgactctgtagcatgtgacattctt aaacattttcatcctgtcattctttctagtgtgtaccctgcaaaaactgtaggcgacggcaattgtttgtacagggcaat atctaggtctttgttaggtactgaatcacatcatttactgtacaggttgttcactgctattgaaatgctatcacatcctt tgtactatgattttgagaacaaacgctatgttgatatgatcaaagataacagaatttttgttagcaactatattgaatta ctcaagtctgttacaactcctggtgcatattcagaaatgatgcacatttatgctttaagcgcatgtataggtgagccaat acgttcatactttcctccacagctcactatggagtttttgtctgagccattttctaggaaagtagtaggcaaaggtgtga ataaatctggtcaagctatttgcacaataatgtggtcacaaatgttgccatttaggaaagaatttaatccaaatcacttt gtaccgctcatgagcaaacagtcagttgattcagttgaaatgcctaccattgatgtatcagatatagctgaaaattctga gtcagattgtattttgaacgatgttgtcaaagttgaatcagagtgtacacaaaatgaatcagactgtatcaatgtcgaaa acagaagtatcaaaactgaatcagaatgtatcaatgttgaatctgacatttcatgttctgcatctgatgttacacgagat atagatgatctttcattttcaatcccagatatttctcaatcagaattatcagacacacttccatcaacattgaatgaatc tgtaaacacgagtgacacagatgtaaacatagaagggtctaatcaaaatttttcctatggtacgctcaatgggagttttt tgtccgttgaagcattgatgaacatttttgaaacccctgatgtagctaaagctttggacaatatcccacctggtctaaaa gaaaatgtgtttttcttacttcacgataaaaacaaaaacgatagacaacgttcatttcccgatgactgtggaatttgggc aagtgattctggggccactcctaaatccatcttccttaaaactaatgatgggaaatacaaactgatctttttgcgtaagg gagagtatcactttcaaaaaaaagtcaaaggcaaaatgacgtatgttaaaatatctcctcaaccatctccctctaaactg accacacttcagaggtattacacgtcccttaaaaaagataaaacatacaaaaaacgagtgacacgcctgttaaatgacga ttcatgtttcactatctgtgagtacataggtaaatttccaggtttatcaagtcatggaaacaccaagataggcgaaactg aataccttaggacccccactaatgtaatggaggaaatgtcaacattactaaaacagaaaacccccttagaggtgtataat gatttgacaattaaacacgatgaactttcaggccctaaaaacaagcaacaagttagggataaaaagaaaaacgataaaaa gaaaactaagacacacattggcaaaaatatagcagatcacatggcagaaatcgacaatcttgtaacacaaaacgactcga ttgtaaaatcagtaattagaagtcaagggaaatcaccatgcctcattttgtataatgatgaacaaataaaagacttaaag aatatctgttgtacaggccaaagcattttgtgcgtagataaaacttttaacctgtgcgacatgcacgtcactgccacgtg ctacaagcaagtgtctgtcgttgacgaaaaaacaaacgaaagtccaattttcttgggtccaatgttcattcacgatagta gtgattttggaacatatgcttccttcttcaatcatttgggtactttgcttgccaacacggacacttcccagctagttatt ggcagtgacgaggaagtcgcacttgtaaacgcaataactcatgcttttccaaatgcacaacacatactatgcacaagaca cataaagcagaatgtcaaccagaagttgactgatgatgcagtcgacaaaactgatagggacaggatcataaatttaattt ttggagtggacggtttggtaaatgcagatgacacaatttgttttgaggaaaaatcaaacatgattgaggaaacatgtgac caaatttcaagtaaatttcttaattactataaaaagaaagtcagaaacaccatccgcactaaaatccaacaacctcaaac cattctaaaacttgaaaactggacaaacaataattcagaatcaatcaatcacgttttaaagcatttagcaaattggaagt cccaacctctcatggatcttgtaaatgccatcaacacatacgtagaggcccagtttaaagatattaggcgtgctctagta ggtgttggccaatttcggctaagtaaaaattaccagcactttgaagtaagtaaaactgtatgggtagggaaaaccgacca agaacgtcttagatacttcaatagatgtagaaattacaatgtcaaggacaaacaaatcgtaacgtctacggacggaaaaa caaaaatcatcgctcctcgtgcccatggaaagaaaataggccaagtaaaaagaaaacgaaatgcaaagacaacaactgtc acaaagaaacagaaactataa |
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Protein
| Protein ID | pfu_aug2.0_581.1_04359.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_581.1_04359.t1 MGTPYPCASCCRNCTEDTIQCASCERWVHRLQHAVNASTKDRKAILASESMLLSTYDVHLPSVVSSIPPMCTDSVACDIL KHFHPVILSSVYPAKTVGDGNCLYRAISRSLLGTESHHLLYRLFTAIEMLSHPLYYDFENKRYVDMIKDNRIFVSNYIEL LKSVTTPGAYSEMMHIYALSACIGEPIRSYFPPQLTMEFLSEPFSRKVVGKGVNKSGQAICTIMWSQMLPFRKEFNPNHF VPLMSKQSVDSVEMPTIDVSDIAENSESDCILNDVVKVESECTQNESDCINVENRSIKTESECINVESDISCSASDVTRD IDDLSFSIPDISQSELSDTLPSTLNESVNTSDTDVNIEGSNQNFSYGTLNGSFLSVEALMNIFETPDVAKALDNIPPGLK ENVFFLLHDKNKNDRQRSFPDDCGIWASDSGATPKSIFLKTNDGKYKLIFLRKGEYHFQKKVKGKMTYVKISPQPSPSKL TTLQRYYTSLKKDKTYKKRVTRLLNDDSCFTICEYIGKFPGLSSHGNTKIGETEYLRTPTNVMEEMSTLLKQKTPLEVYN DLTIKHDELSGPKNKQQVRDKKKNDKKKTKTHIGKNIADHMAEIDNLVTQNDSIVKSVIRSQGKSPCLILYNDEQIKDLK NICCTGQSILCVDKTFNLCDMHVTATCYKQVSVVDEKTNESPIFLGPMFIHDSSDFGTYASFFNHLGTLLANTDTSQLVI GSDEEVALVNAITHAFPNAQHILCTRHIKQNVNQKLTDDAVDKTDRDRIINLIFGVDGLVNADDTICFEEKSNMIEETCD QISSKFLNYYKKKVRNTIRTKIQQPQTILKLENWTNNNSESINHVLKHLANWKSQPLMDLVNAINTYVEAQFKDIRRALV GVGQFRLSKNYQHFEVSKTVWVGKTDQERLRYFNRCRNYNVKDKQIVTSTDGKTKIIAPRAHGKKIGQVKRKRNAKTTTV TKKQKL |
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