Gene
| Gene Model ID | pfu_aug2.0_581.1_04365 |
|---|---|
| Locus | scaffold581.1 : 159993 ... 202621 : - |
| To GenomeBrowser | scaffold581.1:159993..202621 |
| Genes list of scaffold | scaffold581.1 |
| Synonym | pfu_aug1.0_20434.1_47383 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium bicarbonate transporter-like protein 11-like | GO:0005215 GO:0006820 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_581.1_04365.t1 | 1 | 1 | PTS_EIIA_2 | 219 | 299 | 7.5e-09 | 35.4 | 3.5e-12 | 1.7e-08 | 34.2 |
| pfu_aug2.0_581.1_04365.t1 | 1 | 1 | HCO3_cotransp | 340 | 829 | 0.0 | 307.2 | 0.0 | 0.0 | 306.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_581.1_04365.t1 | gi|676463936|ref|XP_009056761.1| | hypothetical protein LOTGIDRAFT_216724 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_581.1_04365.t1 | gi|390334988|ref|XP_784629.3| | 0.0 | |
| pfu_aug2.0_581.1_04365.t1 | gi|676427267|ref|XP_009044891.1| | hypothetical protein LOTGIDRAFT_136234, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_581.1_04365.t1 | gi|585709286|ref|XP_006824326.1| | PREDICTED: sodium bicarbonate transporter-like protein 11-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_581.1_04365.t1 | gi|241620389|ref|XP_002408663.1| | anion exchange protein, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_581.1_04365.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_581.1_04365.t1 atgttggaccctgtccaaacctcattagaggagacaggacctcgatcacttgtcctctctgaatgtcgttcggactcctc ggatgtttacatgcgtgatcttgctccagccggaatatcacttaattccagagacatgagtggcaacgaatctcagacga acggagggacagattcaccaagggtggataactctaaattctcacatgacagtgattcagacgaggaaattagtccggat ggaattcatttgatctctgtaccaaccgccaatggatcctcccctgatgaccgacatggatataatcctaactatccaga ggatgaggagatctcattactacacggtaatttccagaaaattgctgtcaaagatttccatgcagagatccgggctttca gggatgtagagaattttctgagcaggacacagctgatgttagatctccagaaaactgggcttccaaaaatcatggaatct atggttaaaaagcttctcagtaagaaggaagtgaccgcacaattcacggtggacgaggcattaaatgccatatttactca ggattccgtacatgtgttgagtaaaactattcaaggtattgttacaagtgatgaaagtggcttcgattttgatcagtcat ggatctgtgtgatgtgtgatttaccaaacttaacgaaacgacaagtggtgatagctcgcctgagccatccagcaaacttg ggtagcaccagtcaagaagtacagctgattgtcctagtcatggcaccaacaaaggagaaaagcactaagagttccctgga gacagccaggacattctctacattgttcatggatatagacttccgtcatcagctactggaagctaacactgaatttgagt tcaaacagttgcttcaaaccaagaccaaattactgatagaagaacaagggcttccagagaacagaaaatcacatctcatg ctgtctgcatttgaagaggacgattatagtagagactcgcgttgtccggtgggtaaaggaatgtatggagatctcaagag acgcttaccacactatttctcagattacaaggacggaatattcggaaataaaacgatacataaagttacttcaacgacgt ttttcctgtactttgcatgtgttcttccaaatattgcttttggaatgttaaatgatagcaacaccaatggtataatagat gtacagaaggtgttattttctcagtgtgttggtggtgtgttatttgctgtatttggaggacagccgctgatcgttctcct caccacagccccattagcattatatacaaagatcatttataccatatcacaagattttgacttgaacttcagtgccatgt ttgcctgtacagggttgtggaacacattctttctcatcctctactcattctttaatctcagcaaactcatgaaattctca tccagatcaacagaagaaatattttcattattcattacatttgcattttctgccgatgcaatcaaagatacaatcaaaga ttttaacaaaaattaccatacatcagcttgtgattctactaacactgtaacagaaactgacacatctccaagtaacatga caacagttagtgttaccatggcagcaacaacagtaaatgcttccaatgtaaccatgacaacagcacctgtaacaatgatg gaggaatgtttgagagagagcagtattctctttctattactaatgcttggcacggtgtggttaggaataacactgtataa ctttactaaaacgccattcctgaatgcagggaagagggaggtgctggctgactatgctttacctgtggctgtactcatca tggctttctttggatcatttgtcttcaaggatatcaaaatgaagccatttaaatatgaagagaaggagaccatgttttct attgcccctatccacctcctgtcccctggggctatctttgctgcagcagggcttggttttagcctctctcttcttttctt catggatcagaacatctcgagtgccctggtcaatgcaccagcaaacaagttaaagaagggagctgcttaccattgggatt tatttgtggtagctgtaatcaatgctttcttgtcaatcttcaccttcccttgggtacacgctgctctacctcactccccc ctccatgtcagagccctggcagacttagaggatagggtggaccagggtcatgtccatcagattgtagtacatgtgaggga gaccaggctaaccggtatcatatctcacgttctgataggactttctatgttactgctaccttatcctatggcctacatac cccgtcctgtgttagatggtcttttcctgtatgtagctatcacagctctatatggaaaccaactctttgacagaattctt cttttcttcactgaacaggcagcatatccccctaaccattacatccgccgtgtgcctcagaggaaggtccatatcttcac caccatccagttagttcagttacttgtattatgtgtgtttggattctctcccatagcctacatgaaaatggtctttcccg ttctcatcatgctgttgatgccaatcagacataaacttgtaccacatgtgatagaacccaaatatctgaaagcactggac ggccatcttcattga |
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Protein
| Protein ID | pfu_aug2.0_581.1_04365.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_581.1_04365.t1 MLDPVQTSLEETGPRSLVLSECRSDSSDVYMRDLAPAGISLNSRDMSGNESQTNGGTDSPRVDNSKFSHDSDSDEEISPD GIHLISVPTANGSSPDDRHGYNPNYPEDEEISLLHGNFQKIAVKDFHAEIRAFRDVENFLSRTQLMLDLQKTGLPKIMES MVKKLLSKKEVTAQFTVDEALNAIFTQDSVHVLSKTIQGIVTSDESGFDFDQSWICVMCDLPNLTKRQVVIARLSHPANL GSTSQEVQLIVLVMAPTKEKSTKSSLETARTFSTLFMDIDFRHQLLEANTEFEFKQLLQTKTKLLIEEQGLPENRKSHLM LSAFEEDDYSRDSRCPVGKGMYGDLKRRLPHYFSDYKDGIFGNKTIHKVTSTTFFLYFACVLPNIAFGMLNDSNTNGIID VQKVLFSQCVGGVLFAVFGGQPLIVLLTTAPLALYTKIIYTISQDFDLNFSAMFACTGLWNTFFLILYSFFNLSKLMKFS SRSTEEIFSLFITFAFSADAIKDTIKDFNKNYHTSACDSTNTVTETDTSPSNMTTVSVTMAATTVNASNVTMTTAPVTMM EECLRESSILFLLLMLGTVWLGITLYNFTKTPFLNAGKREVLADYALPVAVLIMAFFGSFVFKDIKMKPFKYEEKETMFS IAPIHLLSPGAIFAAAGLGFSLSLLFFMDQNISSALVNAPANKLKKGAAYHWDLFVVAVINAFLSIFTFPWVHAALPHSP LHVRALADLEDRVDQGHVHQIVVHVRETRLTGIISHVLIGLSMLLLPYPMAYIPRPVLDGLFLYVAITALYGNQLFDRIL LFFTEQAAYPPNHYIRRVPQRKVHIFTTIQLVQLLVLCVFGFSPIAYMKMVFPVLIMLLMPIRHKLVPHVIEPKYLKALD GHLH |
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