Gene
| Gene Model ID | pfu_aug2.0_5856.1_22721 |
|---|---|
| Locus | scaffold5856.1 : 1 ... 2165 : - |
| To GenomeBrowser | scaffold5856.1:1..2165 |
| Genes list of scaffold | scaffold5856.1 |
| Synonym | pfu_aug1.0_16.1_07314 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ankyrin repeat protein | GO:0016772 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5856.1_22721.t1 | 3 | 1 | Ank_5 | 18 | 62 | 3.4e-28 | 97.0 | 6.7e-12 | 2.0e-08 | 34.2 |
| pfu_aug2.0_5856.1_22721.t1 | 2 | 1 | Ank_2 | 22 | 84 | 4.3e-26 | 91.0 | 1.9e-19 | 5.6e-16 | 58.6 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 1 | Ank_4 | 22 | 75 | 5.3e-21 | 74.5 | 8.6e-16 | 2.5e-12 | 46.9 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 1 | Ank_3 | 23 | 50 | 1.7e-20 | 71.0 | 1.5e-07 | 0.00043 | 20.2 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 1 | Ank | 24 | 53 | 1.3e-32 | 109.9 | 4.4e-09 | 1.3e-05 | 24.7 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 2 | Ank_5 | 45 | 91 | 3.4e-28 | 97.0 | 3.6e-12 | 1.1e-08 | 35.0 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 2 | Ank | 54 | 86 | 1.3e-32 | 109.9 | 3.8e-14 | 1.1e-10 | 40.7 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 2 | Ank_3 | 54 | 81 | 1.7e-20 | 71.0 | 2.5e-08 | 7.5e-05 | 22.6 |
| pfu_aug2.0_5856.1_22721.t1 | 2 | 2 | Ank_2 | 71 | 117 | 4.3e-26 | 91.0 | 6.3e-13 | 1.9e-09 | 37.7 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 2 | Ank_4 | 71 | 107 | 5.3e-21 | 74.5 | 7.4e-10 | 2.2e-06 | 28.0 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 3 | Ank_5 | 85 | 121 | 3.4e-28 | 97.0 | 7.1e-13 | 2.1e-09 | 37.3 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 3 | Ank | 87 | 118 | 1.3e-32 | 109.9 | 2.1e-14 | 6.3e-11 | 41.5 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 3 | Ank_3 | 88 | 112 | 1.7e-20 | 71.0 | 5.0e-09 | 1.5e-05 | 24.7 |
| pfu_aug2.0_5856.1_22721.t1 | 3 | 3 | Ank_4 | 99 | 118 | 5.3e-21 | 74.5 | 0.0017 | 5.0 | 7.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5856.1_22721.t1 | gi|123498934|ref|XP_001327512.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 1.0e-16 |
| pfu_aug2.0_5856.1_22721.t1 | gi|124001107|ref|XP_001276974.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_5856.1_22721.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5856.1_22721.t1 atggatgcaaaagagggaactgaaacagtaacagctgaattgggaagggttaccaagtatgagacttcagttctccatca tgcagtttcacagaacaaagaggaaattgtcaaactcctcatcatccaagcaaaagctgacgtgaatgcaaaaaataagg atggtagaactcctttacatctagcggccagatctggaaatgctataattgtacaagatctactggatgccaaagcagaa gtggacagaaagacaaacgatgagagaacgccattacatgtagcggcatggaggggtcacacggaggtcgttaggaggct ggtcaatgccggggcttgtgtcaatgttacagatgaagtatgttcatcctatcttcatgaagtcagtctccctacagggt ag |
|
Protein
| Protein ID | pfu_aug2.0_5856.1_22721.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5856.1_22721.t1 MDAKEGTETVTAELGRVTKYETSVLHHAVSQNKEEIVKLLIIQAKADVNAKNKDGRTPLHLAARSGNAIIVQDLLDAKAE VDRKTNDERTPLHVAAWRGHTEVVRRLVNAGACVNVTDEVCSSYLHEVSLPTG |
|