Gene
| Gene Model ID | pfu_aug2.0_586.1_20937 |
|---|---|
| Locus | scaffold586.1 : 15802 ... 32265 : - |
| To GenomeBrowser | scaffold586.1:15802..32265 |
| Genes list of scaffold | scaffold586.1 |
| Synonym | pfu_aug1.0_2914.1_37446 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribose-phosphate pyrophosphokinase mitochondrial-like | GO:0006796 GO:0016772 GO:0055086 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_586.1_20937.t1 | 2 | 1 | Pribosyltran_N | 74 | 163 | 6.9e-07 | 29.0 | 9.2e-10 | 4.6e-06 | 26.3 |
| pfu_aug2.0_586.1_20937.t1 | 2 | 2 | Pribosyltran_N | 239 | 272 | 6.9e-07 | 29.0 | 0.14 | 700.0 | -0.1 |
| pfu_aug2.0_586.1_20937.t1 | 1 | 1 | Pribosyltran | 248 | 297 | 3.6e-09 | 36.4 | 1.4e-12 | 7.2e-09 | 35.4 |
| pfu_aug2.0_586.1_20937.t1 | 1 | 1 | Pribosyl_synth | 257 | 335 | 3.9e-07 | 30.0 | 1.2e-10 | 6.1e-07 | 29.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_586.1_20937.t1 | gi|390338010|ref|XP_791527.2| | PREDICTED: ribose-phosphate pyrophosphokinase 4 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_586.1_20937.t1 | gi|260786649|ref|XP_002588369.1| | hypothetical protein BRAFLDRAFT_116976 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_586.1_20937.t1 | gi|340374583|ref|XP_003385817.1| | PREDICTED: ribose-phosphate pyrophosphokinase 4-like [Amphimedon queenslandica] | 0.0 |
| pfu_aug2.0_586.1_20937.t1 | gi|221128659|ref|XP_002154050.1| | PREDICTED: ribose-phosphate pyrophosphokinase 4-like [Hydra vulgaris] | 0.0 |
| pfu_aug2.0_586.1_20937.t1 | gi|470324798|ref|XP_004349932.1| | ribose-phosphate pyrophosphokinase 3 [Capsaspora owczarzaki ATCC 30864] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_586.1_20937.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20937.t1 atgtccggaagagtgcgagacacccctccggcactaccggcatcaggagcccaggacgcgcggtactcgcttcaccttcg tctcctatcgctgtttactatttggaccnnnnnnnnnnnnnnnnnnnnnnnactagctgttccgaaagtgcaaaatttac aaaggtctctatccttttcaactccgacatctggaccaagaaatgtggaattcagagacacaattcagtggaagaaattt cctgatggatttcccaatctcttcattgaagatgtcaagtacatggcggggaaagatgttatattcataggtagttttca tactcctgatgtcatttttgagcagctttccgtgcttttcatgttcccaagatatttggcaaggtcttttcacttcatta tgccttactttcccactggcacaatggaaagagtggatacggagggacagatagccactgctaagactttagcttccttg ctgtcagccattcctctgaccaccaagggaccagcccagatctgtatatttgacatccatgcactccaggaaaggttcta cttctcagacaacattattccaaggttggagtcagccattccactactcctcaaggagattcgtgagttatcagaccagg ataacctagtgtatgccttccctgatgacggagcgtgtaaaagatttaatcactttttcccaggagacaaccctataaca tgtgtcaaaatccgggatggcaacaaaagggtcgtcaaggtcaaagatggtaacccagaaggcaagcatgtattgatagt ggacgacctagtacagactggtggaacacttaaagaatgtgcaaaggccttatatgacaaaggagctgttaaagtcagtg cctatgttacacatgctgtgttccctaacgattcatggaaaagattcacaggtacagacgttcctttcgagaatttttac gtcacagattcactgccgcatgctcgagaaatttgcaatcaccgtccatttaaacttttatcattagcagagccgattgc agaaatgctccttggttatgacttaatgccgtactgctga |
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Protein
| Protein ID | pfu_aug2.0_586.1_20937.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20937.t1 MSGRVRDTPPALPASGAQDARYSLHLRLLSLFTIWTXXXXXXXXLAVPKVQNLQRSLSFSTPTSGPRNVEFRDTIQWKKF PDGFPNLFIEDVKYMAGKDVIFIGSFHTPDVIFEQLSVLFMFPRYLARSFHFIMPYFPTGTMERVDTEGQIATAKTLASL LSAIPLTTKGPAQICIFDIHALQERFYFSDNIIPRLESAIPLLLKEIRELSDQDNLVYAFPDDGACKRFNHFFPGDNPIT CVKIRDGNKRVVKVKDGNPEGKHVLIVDDLVQTGGTLKECAKALYDKGAVKVSAYVTHAVFPNDSWKRFTGTDVPFENFY VTDSLPHAREICNHRPFKLLSLAEPIAEMLLGYDLMPYC |
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