Gene
| Gene Model ID | pfu_aug2.0_586.1_20939 |
|---|---|
| Locus | scaffold586.1 : 44569 ... 55055 : - |
| To GenomeBrowser | scaffold586.1:44569..55055 |
| Genes list of scaffold | scaffold586.1 |
| Synonym | pfu_aug1.0_4036.1_52168 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_586.1_20939.t1 | 1 | 1 | CUB | 13 | 122 | 4.4e-07 | 29.9 | 3.2e-10 | 6.7e-07 | 29.3 |
| pfu_aug2.0_586.1_20939.t1 | 2 | 1 | Ldl_recept_a | 63 | 67 | 3.2e-06 | 26.9 | 7.0 | 15000.0 | -4.1 |
| pfu_aug2.0_586.1_20939.t1 | 2 | 2 | Ldl_recept_a | 132 | 166 | 3.2e-06 | 26.9 | 1.5e-09 | 3.2e-06 | 26.9 |
Transcript
| Transcript ID | pfu_aug2.0_586.1_20939.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20939.t1 atggaccaaaattgtagacgaactctcacaatttcgtcaccttctattcgactgaagctaacacggtattcaaaatacag gagtaacatggattgcacactcacattaaaagctagcagtaggtcagccaatgaaacaacacgtctgatggttgtgttta ggaaaatagatatcgcaacagaattgttttcttgcaacgactatgtaagcttgaaagacggatcaactggaagtgcaaaa ggtgtatcaggtcttaaatcaaggatgtgcggagaaaacgagccgaggggagcatattataccacttctgaatacctgac tgttgtgttccacagtaacttttttgacaatgatgatggctttgatctcctcattactccatttcactcaggagcatgca gttcctctgagacaaagtgtcgttatggtcagtgtatcgatagaacaaatcgctgtgatgggtacgatcattgcggtgat tactcggacgagtcatgtagtaatctgacacgagttggtgccggagtcatcgtcggagtcatcatcgtcatccttgctat tgtcgctgtggtcatcgttgccgtgtgttgtatcagaaagagaggtggattagggggcataatcaagtatgaggtgctca gatcggaaatctcttag |
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Protein
| Protein ID | pfu_aug2.0_586.1_20939.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20939.t1 MDQNCRRTLTISSPSIRLKLTRYSKYRSNMDCTLTLKASSRSANETTRLMVVFRKIDIATELFSCNDYVSLKDGSTGSAK GVSGLKSRMCGENEPRGAYYTTSEYLTVVFHSNFFDNDDGFDLLITPFHSGACSSSETKCRYGQCIDRTNRCDGYDHCGD YSDESCSNLTRVGAGVIVGVIIVILAIVAVVIVAVCCIRKRGGLGGIIKYEVLRSEIS |
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