Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_586.1_20941
Locus scaffold586.1 : 68156 ... 83354 : +
To GenomeBrowser scaffold586.1:68156..83354
Genes list of scaffold scaffold586.1
Synonym pfu_aug1.0_11451.1_32059

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_586.1_20941.t1 gi|530379739|ref|XP_005271965.1| PREDICTED: coiled-coil domain-containing protein 112 isoform X1 [Homo sapiens] 0.0
pfu_aug2.0_586.1_20941.t1 gi|694912031|ref|XP_009447799.1| PREDICTED: coiled-coil domain-containing protein 112 isoform X2 [Pan troglodytes] 0.0

Transcript
Transcript IDpfu_aug2.0_586.1_20941.t1
Definition-
>pfu_aug2.0_586.1_20941.t1
atgaagagctggagaaaaatgtgcaagcatggcggaacaaaacagaaagagttcagaagtctgagattcttagagaacta
cggaaacttcaagtccatggctctagaaagagagagagcaacacacctgtttagtaagaggagtgaattcagacatgact
acagtatactggaggaactggaaaataaaataagttcagagaggaaatctgagggtgtgaagctgagaacccagctggag
aaaataagtcatatggttaaaagattccacaaagaactaaaagatgtcaagccaactccagagtttgtagaaaagttgaa
agtgattatggaggaaatagagggtactatcagtgctttcaaagagcagcaaaggaaacaatacgaagagttgttaagag
atgagaggaccacattccaagaaatccaggttttagaaaggaaatttgaggcttggtcgcagattaacgacagtgcgagg
tcgaacaagccaatgcaaccccaggctccattagcaagtgctagagatatcaccaaagatttaccgccacaagtcgctgc
ctttgagacattcctggaagaaacagggggagtaagagggggctgggacgaatatgatcatcaaacattcctcaagttta
gattaagacacaaggctcgagccatcttcatacaacatgctctgttggctatacctactcgtactgaggaagagatcaga
gatcatgaggagtggtaccaaacctacctggctcttaatgagaagaagaaagaaagcataaaaaagtggagggaaaaaaa
ggaggtagagaaagacgagttagtgacaaaagccgacaccgatatgtccaaggagaaggaagaggaagaaagaagacaga
tgaggctgaaggagaaaatagaggaagagaagcaggaaagattcagaaaacttaatgcatggaaggtgcagaaggagctt
gagagggctcaggcagaggagaaaaaactaagagaagcactggagaaaaaccgtaaagaggaagaagaaaaacgaagaca
ggaggatgtcaaatgtttggttttagaacataagaggaagaaagatgaggaagaccaatttatggaggagcagaaacgca
tgatggagatggaggagcgagagaggagccggcagctctcagctagggagatagggagattcagggagaggatagaagta
gaaagggatcccaatagacttctcaaaccgacagctggctggaagtcaagaacaaaggaaataggcccatcaggatcagg
gcctttgttacatatgccacacaggtaa

Protein
Protein IDpfu_aug2.0_586.1_20941.t1
Definition-
>pfu_aug2.0_586.1_20941.t1
MKSWRKMCKHGGTKQKEFRSLRFLENYGNFKSMALERERATHLFSKRSEFRHDYSILEELENKISSERKSEGVKLRTQLE
KISHMVKRFHKELKDVKPTPEFVEKLKVIMEEIEGTISAFKEQQRKQYEELLRDERTTFQEIQVLERKFEAWSQINDSAR
SNKPMQPQAPLASARDITKDLPPQVAAFETFLEETGGVRGGWDEYDHQTFLKFRLRHKARAIFIQHALLAIPTRTEEEIR
DHEEWYQTYLALNEKKKESIKKWREKKEVEKDELVTKADTDMSKEKEEEERRQMRLKEKIEEEKQERFRKLNAWKVQKEL
ERAQAEEKKLREALEKNRKEEEEKRRQEDVKCLVLEHKRKKDEEDQFMEEQKRMMEMEERERSRQLSAREIGRFRERIEV
ERDPNRLLKPTAGWKSRTKEIGPSGSGPLLHMPHR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495