Gene
| Gene Model ID | pfu_aug2.0_586.1_20946 |
|---|---|
| Locus | scaffold586.1 : 203169 ... 209939 : + |
| To GenomeBrowser | scaffold586.1:203169..209939 |
| Genes list of scaffold | scaffold586.1 |
| Synonym | pfu_aug1.0_187478.1_35737 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_586.1_20946.t1 | 1 | 1 | Tetraspannin | 13 | 202 | 5.8e-20 | 71.5 | 3.2e-23 | 1.2e-19 | 70.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_586.1_20946.t1 | gi|524882293|ref|XP_005097791.1| | PREDICTED: probable tetraspanin tspA-like [Aplysia californica] | 5.0e-17 |
| pfu_aug2.0_586.1_20946.t1 | gi|676447481|ref|XP_009051421.1| | hypothetical protein LOTGIDRAFT_228215 [Lottia gigantea] | 1.0e-11 |
| pfu_aug2.0_586.1_20946.t1 | gi|390342231|ref|XP_781552.3| | PREDICTED: tetraspanin-1 [Strongylocentrotus purpuratus] | 3.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_586.1_20946.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20946.t1 atggggttaggatgcgcgggaaaatgtggaatgattttcctgatagtactgaacgtattgttcatgctattgggacttgc cctcctgattctggggatcctgatgcaggtgaatgttgacgtcatcagcgatgagatcatgccgctgttacaacaactga ccttcaacggtcttaaccttggtgacctcgccaacggactttccatcacattcatagtctttggagcatttgttctcacc atttctgccttcggtgcttttggtgcttgctgccagaaaaggatctgtctcgtcgtttacgccatcgttgttgccatatt tttcatcgggaagctggttgccgtgattttatggttcgtcatgaacgacaagttacaaagcttcctgaagtcagaactgc agtctcaactggacaacaactacaaaaacgcggacctgacgtcccacgagatatctacagcctggaactacttgttcatg caggctaacaacgctgcctctgacaatatccctatattctgttgttccggtgttacggctgaaaattatgcctcgactac aaacacagcatgtacacaaagtgtcaccagtagttataataccaaggtattggccattgtttcagcgatgtgtgtatgta aaggagggggagacgactctggtaaagtcgtataa |
|
Protein
| Protein ID | pfu_aug2.0_586.1_20946.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20946.t1 MGLGCAGKCGMIFLIVLNVLFMLLGLALLILGILMQVNVDVISDEIMPLLQQLTFNGLNLGDLANGLSITFIVFGAFVLT ISAFGAFGACCQKRICLVVYAIVVAIFFIGKLVAVILWFVMNDKLQSFLKSELQSQLDNNYKNADLTSHEISTAWNYLFM QANNAASDNIPIFCCSGVTAENYASTTNTACTQSVTSSYNTKVLAIVSAMCVCKGGGDDSGKVV |
|