Gene
| Gene Model ID | pfu_aug2.0_586.1_20947 |
|---|---|
| Locus | scaffold586.1 : 211989 ... 220517 : + |
| To GenomeBrowser | scaffold586.1:211989..220517 |
| Genes list of scaffold | scaffold586.1 |
| Synonym | pfu_aug1.0_41203.1_70398 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_586.1_20947.t1 | 1 | 1 | Tetraspannin | 2 | 234 | 3.4e-32 | 111.5 | 8.2e-36 | 4.1e-32 | 111.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_586.1_20947.t1 | gi|72049556|ref|XP_798693.1| | PREDICTED: tetraspanin-11 [Strongylocentrotus purpuratus] | 3.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_586.1_20947.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20947.t1 atgttgggattagcactcttagtgctaggaatagtgatgcaagttgattccggaattgtgaatgacaacatcacgccact actgaaccaactttccatcggcagtctcagtctgggggatctcgtgtccggtttgtctattacatttatagtctttggag ctttcgtgttgatcattgctgcgtttggtgcctttggcgcttgctgtcaaaagaaatcctgtctcgtcatatactctatc attgtgggaattttcctcgttggaaaaatagtagctgtcattctatggtttgttctgaacgacaagttacaaagttggct gaaggataacttgacatcacaacttgagaataactacagatatgacgatataacatcacacgaaatttctaccgcttgga actatatgtttatggagttgtcttgttgcggcgtgaaaaccggtacttccagtgacttcaccagcacaccatggcaggcg ggtaccccgggttatagtactcctaagggctgctgtccctccacaacagcatctaactacgccactgctagcaacacttg tacagcaacgtattacagcacgggatgttacgatgccgtgtatgacaaactgtccacttattccacgggattcattgtta ccggggtcatcatcctggttatagagattttggcgataatatcagcgatttgtgtgtgtaaaggaaaagaagatgatctt gttgtttag |
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Protein
| Protein ID | pfu_aug2.0_586.1_20947.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20947.t1 MLGLALLVLGIVMQVDSGIVNDNITPLLNQLSIGSLSLGDLVSGLSITFIVFGAFVLIIAAFGAFGACCQKKSCLVIYSI IVGIFLVGKIVAVILWFVLNDKLQSWLKDNLTSQLENNYRYDDITSHEISTAWNYMFMELSCCGVKTGTSSDFTSTPWQA GTPGYSTPKGCCPSTTASNYATASNTCTATYYSTGCYDAVYDKLSTYSTGFIVTGVIILVIEILAIISAICVCKGKEDDL VV |
|