Gene
| Gene Model ID | pfu_aug2.0_586.1_20948 |
|---|---|
| Locus | scaffold586.1 : 222622 ... 233268 : - |
| To GenomeBrowser | scaffold586.1:222622..233268 |
| Genes list of scaffold | scaffold586.1 |
| Synonym | pfu_aug1.0_13967.1_32378 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_586.1_20948.t1 | 1 | 1 | Tetraspannin | 9 | 263 | 8.1e-34 | 116.8 | 3.4e-37 | 1.0e-33 | 116.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_586.1_20948.t1 | gi|156545094|ref|XP_001601564.1| | PREDICTED: CD151 antigen [Nasonia vitripennis] | 5.0e-20 |
| pfu_aug2.0_586.1_20948.t1 | gi|195430728|ref|XP_002063400.1| | GK21888 [Drosophila willistoni] | 5.0e-19 |
| pfu_aug2.0_586.1_20948.t1 | gi|125810428|ref|XP_001361490.1| | GA21493 [Drosophila pseudoobscura pseudoobscura] | 8.0e-19 |
| pfu_aug2.0_586.1_20948.t1 | gi|195151401|ref|XP_002016636.1| | GL10398 [Drosophila persimilis] | 4.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_586.1_20948.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20948.t1 atgtcctgttttgtgtcaatgggaaaatgctttctcatcgtaatcaacgctctgttcgtgatactaggagtgatgcttgt cattcccggagcattaatcatcgcagatgtggaatacttgaattccaaagtgatgccgctccttaaacagctatcttatg gcgggacaaatcttgcggacgtcgcagacggcctcgctgtaacgatgcttgtgattggctcagccataatgtttctcgca ttgatgggaatctgtggagcggtgaaaaaatataagacatgcttatgtatatacgctataatcgtgctagcaatgctgat agtacaaattgtattggtgattctatggattgtggcttacgacagagtggagaacagaatacagggcgagatgcttacaa atctacaaagtaaatacacgtatgctgacattacatctgaggaaatatcaacggcgtggaattatctttttatgaagttg aagtgctgtggtgtgaatgctcagacttcgacaacgaacaatgatttcacgagtacaccgtggaagacaggcggggcatc ggataacatcccaatattctgttgttcaggtatagatgagaactcttattccgcggtgacattcacggcgtgtacacaaa ccatgacgacagcagtgtatgcaaatggctgttacaatgaactgaagaaacaactagagaaatataccatttactacata gcggctggcattactatactgatcatagaggcgcttggcgtgctgtttgcatgttgtatttgtaagaatatggggaaaaa ggataacaaagacaaaaagtga |
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Protein
| Protein ID | pfu_aug2.0_586.1_20948.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20948.t1 MSCFVSMGKCFLIVINALFVILGVMLVIPGALIIADVEYLNSKVMPLLKQLSYGGTNLADVADGLAVTMLVIGSAIMFLA LMGICGAVKKYKTCLCIYAIIVLAMLIVQIVLVILWIVAYDRVENRIQGEMLTNLQSKYTYADITSEEISTAWNYLFMKL KCCGVNAQTSTTNNDFTSTPWKTGGASDNIPIFCCSGIDENSYSAVTFTACTQTMTTAVYANGCYNELKKQLEKYTIYYI AAGITILIIEALGVLFACCICKNMGKKDNKDKK |
|