Gene
| Gene Model ID | pfu_aug2.0_586.1_20949 |
|---|---|
| Locus | scaffold586.1 : 263979 ... 272646 : + |
| To GenomeBrowser | scaffold586.1:263979..272646 |
| Genes list of scaffold | scaffold586.1 |
| Synonym | pfu_aug1.0_9676.1_53405 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_586.1_20949.t1 | 1 | 1 | Lectin_C | 70 | 140 | 6.4e-09 | 36.4 | 2.4e-12 | 1.2e-08 | 35.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_586.1_20949.t1 | gi|657597525|ref|XP_008303507.1| | PREDICTED: type-2 ice-structuring protein-like isoform X2 [Stegastes partitus] | 2.0e-10 |
| pfu_aug2.0_586.1_20949.t1 | gi|157128189|ref|XP_001655082.1| | AAEL011079-PA [Aedes aegypti] | 8.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_586.1_20949.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20949.t1 atggacaacgaggttttagttgatttactgtcttctaaaaatgatataagttttgaagaatgtgcaatacgatgcacaaa aagcggcctgcagacctcgttcttttacaatgaccttactaaacaatgtggcctgtattcatccgctgaaattggattgt tatttactatggttgagacgggatggaggttttttcactccgatgggctgaataaagatttatggataggagggtctgat tccgctctggagggacattgggtttggataacatccggtcgcaactttacttacacacattggaagccaaatggcgagcc aaacaatctaagaggcaacgagcattgcgtagttcatggagccgaaggcacatggagggatgtaaattgtggccgtgata aatatagtgtgtgccagaaacatatgacgtag |
|
Protein
| Protein ID | pfu_aug2.0_586.1_20949.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_586.1_20949.t1 MDNEVLVDLLSSKNDISFEECAIRCTKSGLQTSFFYNDLTKQCGLYSSAEIGLLFTMVETGWRFFHSDGLNKDLWIGGSD SALEGHWVWITSGRNFTYTHWKPNGEPNNLRGNEHCVVHGAEGTWRDVNCGRDKYSVCQKHMT |
|