Gene
| Gene Model ID | pfu_aug2.0_587.1_24202 |
|---|---|
| Locus | scaffold587.1 : 103146 ... 131112 : + |
| To GenomeBrowser | scaffold587.1:103146..131112 |
| Genes list of scaffold | scaffold587.1 |
| Synonym | pfu_aug1.0_3050.1_16016 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_587.1_24202.t1 | 3 | 1 | Helitron_like_N | 32 | 64 | 1.7e-25 | 89.8 | 3.0 | 15000.0 | -5.2 |
| pfu_aug2.0_587.1_24202.t1 | 3 | 2 | Helitron_like_N | 329 | 457 | 1.7e-25 | 89.8 | 3.4e-29 | 1.7e-25 | 89.8 |
| pfu_aug2.0_587.1_24202.t1 | 3 | 3 | Helitron_like_N | 642 | 672 | 1.7e-25 | 89.8 | 0.34 | 1700.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_587.1_24202.t1 | gi|585657862|ref|XP_006815908.1| | PREDICTED: uncharacterized protein LOC102803256, partial [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_587.1_24202.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_587.1_24202.t1 atgacagtaatggatcatgatcaacgatgggttttggaacctaaagaagtagcaagtaagagaaaagctagagataatga attctacaaacaaaaggaaagattaaagagacagcaagttagaaaatgtaaaagtaaagaaacaaacaaagcaaaacagt cagagaggaaacggaaggaatacatgagaagtaatgggaattatgtacaaaatgaaaagaaggcatcacagaaaaagaag tatggtttaaatattcaagactgtattgaaatattccatagatctacaagtgatggacctgtctatgtttgttcaacttg tcatcaaacatggttccgtgatagtgtctgcagtgttgaaaacatttcatctacagttgcatttcaacctggtatcttaa ctggggtcaaatcagtattagacaaagagtggatttgtaaaacatgtttgtcaaataccaagaaaaatttagttccaaaa ctatctgttttaaatggtatgaaatggccaataaaacctcctgaattgaatttgcatccaatggaagaaagagttgttgc actgagaatccctttcatgcaaatgagagagttgcctaggggaggacaatactgtgtgaaaggaaatgtagtaaatgttc cagtagatattcagcccgttataaatgcattgcccagacaaatggatgatacaggtactatacctgtaaagctaaagaaa aagatgtcttataagaaatgtgactttaaggaaaacataagaccaacagctgttctgtcagcattgcattggctgatgtc tgaaagtgaactgtacaggaattcaggagttaaaattgacgacacttgggaagaaagtgttacaaatgatagtcgagata tagtacgagaatttgtctcaactgaaccaaatcaaatgcatgaatcataagccagagatcaaaccactcttgataacatc gttcgtttagatgaagggtattacatatttcgacagttacgtaactctcctgcctacttgtcttccaagaagaaagacat ttttgcaatgatcagacagctaggcttaccaacatggtttatgtcgttgtcctcagcagatacccgatggccatttttgc taaagtccttagcccgacttgaagggagaatattatcagatgatgatgtccaaaatatgtcatggcaggagagaagcacg tcagtccaaaaagaccctgtaacttgctctcgcatatttaatgatagagttcaaaagttcattaagatatttttgaaaag ctcgcatgaacctattggccacgtcactgactacttttatcgagtagagttccagcaaagaggttctccacatatacata tgcttgtatggatacatgatgcaccgaagtatccaaaagactcagaagactctgtcgttcaattcgttgaccagttcaag ggatgttatttcataaatacatcgcctcctcatgaaagggtagtgctgttgaagcaacaatctgatctcatggaactaag tccagaatccactgacgttcattatcagaatataatctcacgatattccaagagacctaaacagctagaaaactggtgtc ttgcagactatgcgtctcaacttgaagtgaagtatccagatgacaaaaagaaaaatgaaaatgatgaagaggtgaatgac gatgaaccatatccagatcaagatgataattcagaattttcagatgaagatactcttgtcactctaagaaatggtatcac aataagaaggcgtatacacgacctcattttacggtatgtgcgctatagcttgaaaactgatccagaaaatcattacagag aaaagttgctattgttcatgccatggcgagatgaaagtcttgatttattgaatggatatgggagttatgaggagcactat aaggaaattcattttttagttgaccataaagcaagtttgtacgagaagaatattgaggagatagagcaagctatgcaaca ggctgaagaagaatttgcacagcatgatgaaattgctccaaatgcccagcaagcaaatgctgatgatgaagctgaaggtc agcgagaggcgagagaatttgtacatttcaatcctgatagacctcttgagcacaggcgttatgacataggcaatgatatc ggtgcttcctcttctgtaccatgcgttgaatttcatggtgaccgaatatctgatgacgagtacttgaagttacgaactaa cgatttaaccgaggaagacgaaagagaaattgagaagcacagtgtaagtccagcccaagaaaattatccaaagaatgttc cgcatttgtttgttgaaaataaatttgtagatagcttcaacaaagaattcatcgaaaacttaacaacaataaaggttgag gttactagtcatgatgccataacagcagatgtaccgtggtcaaccaaagatcgacttctgaaaagcctaccgaaagattc aagcaaaacagcaaatttagctcatactttagtacttgcagttgggatgatttatgacatcacaattaatctagatgtaa atgatggaatagccaatgatcccaatataaaagccgcagatataattggtatcatggagtcaaggctatgtagttctgat cacaatgaaatgtatgcattagacggtttcgaaatgtacagatgtgatcaaaacgtacaaataagtgacagaagacctag tcatggacttgttttatatctatcagatagtttagagtcgcatcagaaaccttcagaaggttacaacaacgttttgaatg caaccacagatagccaaaagaaaacgaaatacgtgcttttccaggaacctatcgaatctttccttgttgagaataacaaa cagtctctcataagtgatcctgatcgcttagaagattatatnattaatttggaagtgtggagatttctagagcaatctgg caatgtaatgctaacgcgtaattcacttagattcctatgcggttcattagacaacgagagagacgtgtttcacttcctac actttatgcagacgataggaaattatcctgatattagaacctttggtatcctgttttattcaccttgggcaacttatgat ctttcgtatcagaagaagcttttgatggaaatgagttggctgaatatttgcccaaatgaaaaatttcttcgacaaatgaa tgaaaggatccttgaaatcaacagtgagatgttaaaacaggaaaacagttcgagagatgttgataacacagataaaccat acattagccgtgaagaattcgagaacttcgtgaccttctaccacgagtggctgacaatgtacaatttgtaa |
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Protein
| Protein ID | pfu_aug2.0_587.1_24202.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_587.1_24202.t1 MTVMDHDQRWVLEPKEVASKRKARDNEFYKQKERLKRQQVRKCKSKETNKAKQSERKRKEYMRSNGNYVQNEKKASQKKK YGLNIQDCIEIFHRSTSDGPVYVCSTCHQTWFRDSVCSVENISSTVAFQPGILTGVKSVLDKEWICKTCLSNTKKNLVPK LSVLNGMKWPIKPPELNLHPMEERVVALRIPFMQMRELPRGGQYCVKGNVVNVPVDIQPVINALPRQMDDTGTIPVKLKK KMSYKKCDFKENIRPTAVLSALHWLMSESELYRNSGVKIDDTWEESVTNDSRDIVREFVSTEPNQMHESXARDQTTLDNI VRLDEGYYIFRQLRNSPAYLSSKKKDIFAMIRQLGLPTWFMSLSSADTRWPFLLKSLARLEGRILSDDDVQNMSWQERST SVQKDPVTCSRIFNDRVQKFIKIFLKSSHEPIGHVTDYFYRVEFQQRGSPHIHMLVWIHDAPKYPKDSEDSVVQFVDQFK GCYFINTSPPHERVVLLKQQSDLMELSPESTDVHYQNIISRYSKRPKQLENWCLADYASQLEVKYPDDKKKNENDEEVND DEPYPDQDDNSEFSDEDTLVTLRNGITIRRRIHDLILRYVRYSLKTDPENHYREKLLLFMPWRDESLDLLNGYGSYEEHY KEIHFLVDHKASLYEKNIEEIEQAMQQAEEEFAQHDEIAPNAQQANADDEAEGQREAREFVHFNPDRPLEHRRYDIGNDI GASSSVPCVEFHGDRISDDEYLKLRTNDLTEEDEREIEKHSVSPAQENYPKNVPHLFVENKFVDSFNKEFIENLTTIKVE VTSHDAITADVPWSTKDRLLKSLPKDSSKTANLAHTLVLAVGMIYDITINLDVNDGIANDPNIKAADIIGIMESRLCSSD HNEMYALDGFEMYRCDQNVQISDRRPSHGLVLYLSDSLESHQKPSEGYNNVLNATTDSQKKTKYVLFQEPIESFLVENNK QSLISDPDRLEDYXINLEVWRFLEQSGNVMLTRNSLRFLCGSLDNERDVFHFLHFMQTIGNYPDIRTFGILFYSPWATYD LSYQKKLLMEMSWLNICPNEKFLRQMNERILEINSEMLKQENSSRDVDNTDKPYISREEFENFVTFYHEWLTMYNL |
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