Gene
| Gene Model ID | pfu_aug2.0_589.1_30950 |
|---|---|
| Locus | scaffold589.1 : 181637 ... 207548 : - |
| To GenomeBrowser | scaffold589.1:181637..207548 |
| Genes list of scaffold | scaffold589.1 |
| Synonym | pfu_aug1.0_8492.1_31590 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_589.1_30950.t1 | 3 | 1 | SUFU | 12 | 47 | 1.4e-12 | 47.5 | 3.6e-06 | 0.026 | 14.0 |
| pfu_aug2.0_589.1_30950.t1 | 3 | 2 | SUFU | 63 | 152 | 1.4e-12 | 47.5 | 2.1e-11 | 1.5e-07 | 31.1 |
| pfu_aug2.0_589.1_30950.t1 | 1 | 1 | SUFU_C | 164 | 349 | 0.0 | 159.9 | 0.0 | 0.0 | 159.3 |
| pfu_aug2.0_589.1_30950.t1 | 3 | 3 | SUFU | 272 | 315 | 1.4e-12 | 47.5 | 0.91 | 6700.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_589.1_30950.t1 | gi|524885652|ref|XP_005099431.1| | PREDICTED: suppressor of fused homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_589.1_30950.t1 | gi|676450365|ref|XP_009052355.1| | hypothetical protein LOTGIDRAFT_159604 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_589.1_30950.t1 | gi|269785025|ref|NP_001161664.1| | suppressor of fused-like protein [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_589.1_30950.t1 | gi|591385034|ref|XP_007066968.1| | PREDICTED: suppressor of fused homolog [Chelonia mydas] | 0.0 |
| pfu_aug2.0_589.1_30950.t1 | gi|617463056|ref|XP_007572693.1| | PREDICTED: suppressor of fused homolog isoform X2 [Poecilia formosa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_589.1_30950.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_589.1_30950.t1 atgcgaggcgctggaagtgaaagtgggttgggaggtccagatccgttagattacattagtatgtatgctaatcctggaga cgagaaacgtggtatccctatgcattggcattacataagctacgggctgtctgatctccatggtgatgggagagtccatg accatgccttcaggtgtaacggaaacgaagaaaatgtgctatacagtggagaccatgtaccttggcacattcccctggac ggtagtgaatctcgtgtacaacacatgctgatgtcagaggatgcacaacttctccctatcaccactccatttggaatcgt taattttgtccagattataggggtttgtgaagaagagttaaaggcagcacagcactggaatggacctggtgttatagaat tgatcagagtactacaatgtgctggaggaccttggcttatcacagacatgagacgaggagagacaatatttgaaatagaa cctcatttacaagaccaagtagaccaggggattgagcaggagggatctaatctgagtggtgttaacagccgctgttcctg ggaggagccaggggacggaggggaggagatttataacgaggaggagagggagggaagactggtggaggagcgcaggatga gtaacgaagtgtcagacagacctcacatatcagactttgaatcggagcaaatcaaagcagcactacaaaaaggtttacag tttcctagaaggaattcacgagattatgaatttaatgaaaataccagacagtctcggaagcaatcatttgatagcaatgc tagctcagaaggaccaacagaattattacgaactcgaactttggattttgtacatttgaaattcaatttagaagctgggt cattgttacccttagcattgaaaggacgattaagacacggcagacattttacgtacatgagtgccttaaatgataccgcg ataacgttagtgtccactagtgttaatggatcaatagcagatgaaaatcacccttttgcagctcatggaccctggttaca ggttgtgcatgcgcaagtaaaaaggcaccctttacttgaatgtttataa |
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Protein
| Protein ID | pfu_aug2.0_589.1_30950.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_589.1_30950.t1 MRGAGSESGLGGPDPLDYISMYANPGDEKRGIPMHWHYISYGLSDLHGDGRVHDHAFRCNGNEENVLYSGDHVPWHIPLD GSESRVQHMLMSEDAQLLPITTPFGIVNFVQIIGVCEEELKAAQHWNGPGVIELIRVLQCAGGPWLITDMRRGETIFEIE PHLQDQVDQGIEQEGSNLSGVNSRCSWEEPGDGGEEIYNEEEREGRLVEERRMSNEVSDRPHISDFESEQIKAALQKGLQ FPRRNSRDYEFNENTRQSRKQSFDSNASSEGPTELLRTRTLDFVHLKFNLEAGSLLPLALKGRLRHGRHFTYMSALNDTA ITLVSTSVNGSIADENHPFAAHGPWLQVVHAQVKRHPLLECL |
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