Gene
| Gene Model ID | pfu_aug2.0_5890.1_02794 |
|---|---|
| Locus | scaffold5890.1 : 14040 ... 20435 : - |
| To GenomeBrowser | scaffold5890.1:14040..20435 |
| Genes list of scaffold | scaffold5890.1 |
| Synonym | pfu_aug1.0_23888.1_11578 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5890.1_02794.t1 | 2 | 1 | C1q | 29 | 52 | 1.3e-25 | 89.8 | 0.98 | 2100.0 | -1.4 |
| pfu_aug2.0_5890.1_02794.t1 | 2 | 2 | C1q | 179 | 301 | 1.3e-25 | 89.8 | 6.1e-29 | 1.3e-25 | 89.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5890.1_02794.t1 | gi|734650138|ref|XP_010754386.1| | PREDICTED: cerebellin-1-like [Larimichthys crocea] | 2.0e-14 |
| pfu_aug2.0_5890.1_02794.t1 | gi|554875326|ref|XP_005947559.1| | PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503-like [Haplochromis burtoni] | 4.0e-13 |
| pfu_aug2.0_5890.1_02794.t1 | gi|584011608|ref|XP_006800715.1| | PREDICTED: uncharacterized protein LOC102780625 [Neolamprologus brichardi] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_5890.1_02794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5890.1_02794.t1 atggagtcggaaacaaaagaggttgtgagagcaatgaattcgacaatccaggcacaacaacagatagaaaggtcaatgaa tactacaatccaagaccaacaacacaggataacattaattgaatcagcaaaccaggcgcaacaacagatagaaaggtcaa ttaacactacgatccaagatcaacaacacaggataactgttaaggaatcgacaatacaaatactgaaacaagacaatcaa acaataaacgaagaagtagaattcatttgtaaaaataactcagctgaaatcgagcatctgatagaagtggacaaaaaaag aaatcagagctatgaagctttccaaattgctgttcaagatcttgtaataaactttaacacgttaaggaatacaagccaac tacagataggcagtataaatgataacctgacatatctggccagacaggtccattatacgtcactctcgttccttgattct cagaaaatactgaaagaattagagaatgccattaatgagaaaaatagaacgtatgcatttacagtatcatcttcatctaa cttagtaaattatgataacaagaaaatagtgtatgataaagtgatcaccaataaaggaggagcctacaacagtaatacag gtatatttacctgtccctcacctggtacctatgtcttcacgtggtccaccatgtctaattctgccacacaattctgcaaa gcttacatctaccataacggtaatcagctgttgatgtcacacagtattgaacaaaacggtggttactatgaggcagctag taataccatactgctgtcattaactgtgggtgaccacgtctggatacagacatcctatggtgcatactgttatggatatc ctcacacggcattctctggatggaaagtataa |
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Protein
| Protein ID | pfu_aug2.0_5890.1_02794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5890.1_02794.t1 MESETKEVVRAMNSTIQAQQQIERSMNTTIQDQQHRITLIESANQAQQQIERSINTTIQDQQHRITVKESTIQILKQDNQ TINEEVEFICKNNSAEIEHLIEVDKKRNQSYEAFQIAVQDLVINFNTLRNTSQLQIGSINDNLTYLARQVHYTSLSFLDS QKILKELENAINEKNRTYAFTVSSSSNLVNYDNKKIVYDKVITNKGGAYNSNTGIFTCPSPGTYVFTWSTMSNSATQFCK AYIYHNGNQLLMSHSIEQNGGYYEAASNTILLSLTVGDHVWIQTSYGAYCYGYPHTAFSGWKV |
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