Gene
| Gene Model ID | pfu_aug2.0_59.1_30095 |
|---|---|
| Locus | scaffold59.1 : 143039 ... 166015 : - |
| To GenomeBrowser | scaffold59.1:143039..166015 |
| Genes list of scaffold | scaffold59.1 |
| Synonym | pfu_aug1.0_12852.1_68557 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_59.1_30095.t1 | 1 | 1 | RVT_1 | 165 | 302 | 6.1e-23 | 81.3 | 3.7e-26 | 1.4e-22 | 80.1 |
| pfu_aug2.0_59.1_30095.t1 | 1 | 1 | Death | 1040 | 1106 | 4.0e-13 | 48.9 | 2.9e-16 | 1.1e-12 | 47.5 |
Transcript
| Transcript ID | pfu_aug2.0_59.1_30095.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30095.t1 atgaaattnaagacaacagaaatttgtataaaccccattgcattgaagtttataacagccactggagaagtgtgtagatt tttaggaaagacaactcttgcattcttagtgggaaaacagaatttgaagcaagatttcttaattgctgacatagaaaatg agggaatcttgggattaaactttatgaaacaaaacaaatgtgaaatttctatgtctgagggtctcatttgtgtaaatggt gagaggatttgttttgaaaacaaagacaatttgaatgaaattagtgttttcagagtgtttgcaaatgagaaaatcattat tcctccagaatctgaaattatcattcctggaaaagctgaatttcagttgagtggaaatagaaatggtgttgtggtaggaa aaccacaatttttggagaaaagtggacttttagtagcaaaatcattagtggatacatccaaagactttctacctgtgcac ttggctaattttagcaaagaaaagtgtgttattcatccaaggacacatattgcaagttgatccaaatggtttagcacttt agatttgaagtctgggttctggcaagttggtgtagctgaaaaagatagggagaaaactgcattttctattcatggtagtg gtttatggcagtggaaagtcatgccatttggcctgtgcaactcaccagctacttttgaaaggcttatggaaaaggtttta gcaagattaacatggcgaaagtgtctgttatttattgatgacatcattgtttactcaaaaagttttgatgaacaaatcca aaacttggaggaagtatttcaaaggttacaggaggcaaaattgaaacttaacccccataagtgtgttttactccaaaaac aagtttcatttttaggacatgtgatcagtgagaatggtgtgtctacagatcctaagaaaatacaagatgttatagagtgg cctacccctcgaacagtgaaagatgttcgaagttttcttggactttgttcatattataggaaatttgtcctaaacttttc taccatagcaaaacctttgacaaagttgacggagaaaaaccagaattttaggtggacaaatgaatgtgaaatagctttcc aaaagttgngtgagaatggtgtgtctacagatcctaagaaaatacaagatgttatagagtggcctacccctcgaacagtg aaagatgttcgaagttttcttggactttgttcatattataggaaatttgtcctaaacttttctaccatagcaaaaccttt gacaaagttgacggagaaaaaccagaattttaggtggacaaatgaatgtgaaatagctttccaaaagttgaaacaagctt tagtcagtgctcctattctagcataccctcaaagtgaaggcaaattcattctagatactgatgctagtaacttgggcatg ggtgccgtactatcacaaattcagggcaatcaagagaaagttatatgctatttcagtaagaccttctcaaaatcagagag acattattgtgtgacaaggaaagaacttttagctattgtagctgccataaaacagtttcatcattatctgtatgggagaa attttctagtaagaagtgatcacggagcactaaggtggctctttaatttcaagaagcctgaaggacaaatggcgagtgtt agatacggtgattttactgtggttacaccatcaggagaaacaggaaacagggcaatggacgagttaaataaatggaaagt agaaagactgccatccctcattagtaaagctgataaggaaagaaacgtggaaccccctaggaaaaagccaaagggagatg aaaggaaggtgatttcctctactccaagaccctcgatggacttagaggaaattaccgacatagaattagaagaatctgcc cctactccagtacctaagaaatctgagaagcgagggaggactaggatcaggacagctccgaagtccaggtcgcgatgctc ctcctcctcctcttcatcatcatcatcatcgtcttcctcatcatccaaaaagtccagttctagctctagctccagtcagc catccaacaagacaagtacaagtaaacctacagaaaaagaaacaacgactgcagtgaatgctttagtgaaaatcttggat aataataataatactacatctagtgaacataacgaggatattaatgtgacaccgacggaaaacacacagccagagccatg ttcaaacaaggaaaacaacaaggaactaccaagtaatactaactacgacgcctctagatttgaaaacattactcctccaa cttctccaagaaatcctctgccgtacaacattcacttaggatccatcagaaatccaattattattcctcccactgttaca gatttaaaagaagaccaagaaaacaaaattaaactatacgggtttctacattttcctgtttcctgcaaacatgtaaacaa aactttggtaaactttggaaggaaaagaaacttgatgagtatagcggaagttgagcgactgtggttacgatttagacagt taggaagtgacgagaacggagagctgacggagtccgtattgatggccagtccgatctggcaggacgcattctctagaaac gtcatgaagaaatttatggatgcaaagacaaagaagatcacgtttgaaaatttccttagaggtctaagatggtgtgaaat ggctactttagaagaaaaactcagaggtgtgtttcgtttaatgaacaatggcaatgaggtacctaaagaaatattcaaga aaatcgtagagagggtttatacagatcccaaggataaagagaatatacccagaataacagatgtactttatgctcaaatg gatccaagtggaaaaggtagtataacagaagaccaatttgtcagaggttgtcaacaagttcccagaaacttagtggatga tgctctgaactttgaactcttaccatcttacatgaaagagaggctacatcaaaatctccctgagttcagcaatgaggggc agatgacgcctgtagcggggagtagcggaattccgtccgacacagtcctaaaagatgttgcactgaagatacacaaacgg gactgggagagggtggcaaataaactggatataatgggagaggacatagatgaattaaggagtcagtataaggacccaag ggctcaggtttatcaaatgctgaaactgtggaagagtagagaccagagcatggctagtacaggtgctctacaaacggctc tgagaggtgccggcatggccgatgtggctcagtcactcagctga |
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Protein
| Protein ID | pfu_aug2.0_59.1_30095.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30095.t1 MKXKTTEICINPIALKFITATGEVCRFLGKTTLAFLVGKQNLKQDFLIADIENEGILGLNFMKQNKCEISMSEGLICVNG ERICFENKDNLNEISVFRVFANEKIIIPPESEIIIPGKAEFQLSGNRNGVVVGKPQFLEKSGLLVAKSLVDTSKDFLPVH LANFSKEKCVIHPRTHIASXSKWFSTLDLKSGFWQVGVAEKDREKTAFSIHGSGLWQWKVMPFGLCNSPATFERLMEKVL ARLTWRKCLLFIDDIIVYSKSFDEQIQNLEEVFQRLQEAKLKLNPHKCVLLQKQVSFLGHVISENGVSTDPKKIQDVIEW PTPRTVKDVRSFLGLCSYYRKFVLNFSTIAKPLTKLTEKNQNFRWTNECEIAFQKLXENGVSTDPKKIQDVIEWPTPRTV KDVRSFLGLCSYYRKFVLNFSTIAKPLTKLTEKNQNFRWTNECEIAFQKLKQALVSAPILAYPQSEGKFILDTDASNLGM GAVLSQIQGNQEKVICYFSKTFSKSERHYCVTRKELLAIVAAIKQFHHYLYGRNFLVRSDHGALRWLFNFKKPEGQMASV RYGDFTVVTPSGETGNRAMDELNKWKVERLPSLISKADKERNVEPPRKKPKGDERKVISSTPRPSMDLEEITDIELEESA PTPVPKKSEKRGRTRIRTAPKSRSRCSSSSSSSSSSSSSSSSKKSSSSSSSSQPSNKTSTSKPTEKETTTAVNALVKILD NNNNTTSSEHNEDINVTPTENTQPEPCSNKENNKELPSNTNYDASRFENITPPTSPRNPLPYNIHLGSIRNPIIIPPTVT DLKEDQENKIKLYGFLHFPVSCKHVNKTLVNFGRKRNLMSIAEVERLWLRFRQLGSDENGELTESVLMASPIWQDAFSRN VMKKFMDAKTKKITFENFLRGLRWCEMATLEEKLRGVFRLMNNGNEVPKEIFKKIVERVYTDPKDKENIPRITDVLYAQM DPSGKGSITEDQFVRGCQQVPRNLVDDALNFELLPSYMKERLHQNLPEFSNEGQMTPVAGSSGIPSDTVLKDVALKIHKR DWERVANKLDIMGEDIDELRSQYKDPRAQVYQMLKLWKSRDQSMASTGALQTALRGAGMADVAQSLS |
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