Gene
| Gene Model ID | pfu_aug2.0_59.1_30096 |
|---|---|
| Locus | scaffold59.1 : 169006 ... 176297 : + |
| To GenomeBrowser | scaffold59.1:169006..176297 |
| Genes list of scaffold | scaffold59.1 |
| Synonym | pfu_aug1.0_15162.1_61461 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_59.1_30096.t1 | 4 | 1 | Arm | 34 | 60 | 2.6e-09 | 36.5 | 0.065 | 120.0 | 2.7 |
| pfu_aug2.0_59.1_30096.t1 | 4 | 1 | CLASP_N | 36 | 61 | 6.5e-06 | 25.6 | 8.6e-06 | 0.016 | 14.5 |
| pfu_aug2.0_59.1_30096.t1 | 2 | 1 | Vac14_Fab1_bd | 37 | 98 | 1.6e-06 | 28.3 | 5.0e-05 | 0.093 | 13.1 |
| pfu_aug2.0_59.1_30096.t1 | 5 | 1 | HEAT_EZ | 39 | 60 | 3.5e-07 | 30.5 | 0.032 | 59.0 | 4.3 |
| pfu_aug2.0_59.1_30096.t1 | 5 | 1 | HEAT | 40 | 60 | 8.4e-14 | 50.3 | 9.9e-05 | 0.18 | 11.9 |
| pfu_aug2.0_59.1_30096.t1 | 2 | 1 | HEAT_2 | 40 | 132 | 3.2e-13 | 49.7 | 4.0e-06 | 0.0075 | 16.5 |
| pfu_aug2.0_59.1_30096.t1 | 5 | 2 | HEAT_EZ | 64 | 97 | 3.5e-07 | 30.5 | 0.23 | 430.0 | 1.5 |
| pfu_aug2.0_59.1_30096.t1 | 4 | 2 | CLASP_N | 77 | 105 | 6.5e-06 | 25.6 | 0.067 | 120.0 | 1.8 |
| pfu_aug2.0_59.1_30096.t1 | 5 | 2 | HEAT | 79 | 105 | 8.4e-14 | 50.3 | 0.15 | 290.0 | 2.0 |
| pfu_aug2.0_59.1_30096.t1 | 4 | 2 | Arm | 114 | 133 | 2.6e-09 | 36.5 | 0.66 | 1200.0 | -0.5 |
| pfu_aug2.0_59.1_30096.t1 | 5 | 3 | HEAT_EZ | 119 | 127 | 3.5e-07 | 30.5 | 7.4 | 14000.0 | -3.2 |
| pfu_aug2.0_59.1_30096.t1 | 2 | 2 | Vac14_Fab1_bd | 148 | 224 | 1.6e-06 | 28.3 | 7.9e-05 | 0.15 | 12.4 |
| pfu_aug2.0_59.1_30096.t1 | 4 | 3 | Arm | 159 | 186 | 2.6e-09 | 36.5 | 2.0e-08 | 3.7e-05 | 23.3 |
| pfu_aug2.0_59.1_30096.t1 | 2 | 2 | HEAT_2 | 162 | 225 | 3.2e-13 | 49.7 | 1.1e-10 | 2.1e-07 | 31.1 |
| pfu_aug2.0_59.1_30096.t1 | 5 | 4 | HEAT_EZ | 163 | 186 | 3.5e-07 | 30.5 | 1.3e-07 | 0.00025 | 21.4 |
| pfu_aug2.0_59.1_30096.t1 | 4 | 3 | CLASP_N | 163 | 182 | 6.5e-06 | 25.6 | 0.0052 | 9.7 | 5.4 |
| pfu_aug2.0_59.1_30096.t1 | 5 | 3 | HEAT | 164 | 189 | 8.4e-14 | 50.3 | 2.7e-08 | 5.1e-05 | 23.0 |
| pfu_aug2.0_59.1_30096.t1 | 4 | 4 | Arm | 205 | 225 | 2.6e-09 | 36.5 | 0.0038 | 7.0 | 6.6 |
| pfu_aug2.0_59.1_30096.t1 | 5 | 5 | HEAT_EZ | 205 | 225 | 3.5e-07 | 30.5 | 0.048 | 90.0 | 3.7 |
| pfu_aug2.0_59.1_30096.t1 | 5 | 4 | HEAT | 206 | 226 | 8.4e-14 | 50.3 | 0.0013 | 2.5 | 8.4 |
| pfu_aug2.0_59.1_30096.t1 | 4 | 4 | CLASP_N | 208 | 223 | 6.5e-06 | 25.6 | 1.1 | 2100.0 | -2.2 |
| pfu_aug2.0_59.1_30096.t1 | 5 | 5 | HEAT | 230 | 242 | 8.4e-14 | 50.3 | 0.97 | 1800.0 | -0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_59.1_30096.t1 | gi|676433056|ref|XP_009046775.1| | hypothetical protein LOTGIDRAFT_224792 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_59.1_30096.t1 | gi|524881219|ref|XP_005097264.1| | PREDICTED: rhabdoid tumor deletion region protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_59.1_30096.t1 | gi|260820768|ref|XP_002605706.1| | hypothetical protein BRAFLDRAFT_279978 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_59.1_30096.t1 | gi|115666425|ref|XP_785178.2| | PREDICTED: rhabdoid tumor deletion region protein 1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_59.1_30096.t1 | gi|156399744|ref|XP_001638661.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_59.1_30096.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30096.t1 atggcacatactgtgatttccgcaaaataccctccacagatagatccgactaggacaccatatgcattcggcgacagagc tctgccacgccttgtaagtgaatacagtattgctgagagtttaaagaagctactcacagatgctgatcttacagttagac aaaaagctacagagtgtttgtttgttataggaggtcatgctgttgggagagatgcatttctagagaatcagataattact cctgtatctaagttgtttgatgataaagaggatattgctcgtaaaaatgcccacaaggcagtggaaatgatttcagaaac accacttggagctgaaggaattgtagaagcaaacttaatagccacacttgttaaaaaattagcatcagaagtagatgaaa taaagggtgatgagttcatagggaaaggagttattctctggacaagtataccattagagggtaaaaataaagcagtagaa gtgaaatcagttccagctcttgtcaaattactcaaagatcaaagttcagatgtcagagctaatgctgctggagctctcat ggccattactatcacaacaaaaggaaaatatacagcaataaatgaagggaaagcaatacagccattggtagacctggttg atgactcagtatcagaagtccgactcaatgcattgaagatcaaggcacacaccacagatcccattcctgcagttgtcaaa gcagcggaaattgctgtaagggttattacatggaaaccatga |
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Protein
| Protein ID | pfu_aug2.0_59.1_30096.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30096.t1 MAHTVISAKYPPQIDPTRTPYAFGDRALPRLVSEYSIAESLKKLLTDADLTVRQKATECLFVIGGHAVGRDAFLENQIIT PVSKLFDDKEDIARKNAHKAVEMISETPLGAEGIVEANLIATLVKKLASEVDEIKGDEFIGKGVILWTSIPLEGKNKAVE VKSVPALVKLLKDQSSDVRANAAGALMAITITTKGKYTAINEGKAIQPLVDLVDDSVSEVRLNALKIKAHTTDPIPAVVK AAEIAVRVITWKP |
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