Gene
| Gene Model ID | pfu_aug2.0_59.1_30103 |
|---|---|
| Locus | scaffold59.1 : 245444 ... 269383 : - |
| To GenomeBrowser | scaffold59.1:245444..269383 |
| Genes list of scaffold | scaffold59.1 |
| Synonym | pfu_aug1.0_41189.1_63065 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_59.1_30103.t1 | 1 | 1 | HECT | 559 | 634 | 1.6e-07 | 30.8 | 1.7e-11 | 2.5e-07 | 30.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_59.1_30103.t1 | gi|499023868|ref|XP_004562696.1| | 1.0e-28 | |
| pfu_aug2.0_59.1_30103.t1 | gi|617520658|ref|XP_007544337.1| | PREDICTED: uncharacterized protein LOC103132471 [Poecilia formosa] | 3.0e-27 |
| pfu_aug2.0_59.1_30103.t1 | gi|554887058|ref|XP_005953077.1| | PREDICTED: uncharacterized protein LOC102292789 [Haplochromis burtoni] | 6.0e-27 |
| pfu_aug2.0_59.1_30103.t1 | gi|542242508|ref|XP_005458425.1| | PREDICTED: uncharacterized protein LOC102083044 [Oreochromis niloticus] | 1.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_59.1_30103.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30103.t1 atgtcatctgagattgttaccatgggatcaaacaagatattgacgtgttatagaacgatggagttgaaggtaaaccgaca tggctcctccaattacctcggattatggacgtgtaaatattatgcaaatgctgctcatttcaatatcgccaaaaagcaag aaaaactggatccaccatctttcaatcaaatcaacgtaaccaagccaggtcattccaacttagtatctgggtcagtgagg tgctttgcggtacctaaaggtgcaggaccatacttctatcaaccaaacattcagacgaattggatttaccccacccagga tgttggttacaacattacgattaagaaggatgtggcttacataaagaacgtgaattgtgccgtaaatgcatctcaaccga tattctgtcaggcgagggaaggtctggggccgtactcggagagaagccatttcttcccacattatctctgctatcattac acgacaactaccgttgggtcgccagtggccgtaacaacagccgaggacaacagaaccaatttggtagtggggctagttat tagcgatgatttccttgatacagactctgacatagatcgttatatttccaacatcacacgcggagaagatcgtactgact ggagtcagatagcgaacgtttatgctcagggtgacaaccccccgattagtgtcgcacgtccaagatgggaacagaacggc agaccctctatgccagctatgcctgttataaatttggcactagatgatactagttctgaaactgagggagaaagtaatac agagagcactaacccgacaacgccgtcacaacttgacgagaatttaaacgtgcctggggcggagggagttgacaggaatg caattataaaagaagtggaaatatgtctgcgcaatttgacgaaatctctgagtcacattcaacagcaagtagaaataaca cgggaaaacttagtggacaatctcctgaatatttactctgatccgtgtatcgtggagggaagtcttcatataaagatcat aggggaggagggatctgattgggggggagtgtcacgtgatgtcttcacatcgttctggagcgaagtgtcgttaacatatt ttctgggtgacctagtccatgtgccttacctcccaccacatcgacttgaggaaatgtacaagtttcgattgatggggaga attctgtctcacagtacggctgtactcggctacatcccaatggccatatgtaaaagtaccatgatggtgacgataataga cgcgacagaaattgcagaagatgtattattagaggactttttattatatttggacaaggaagacagaactttattacaaa gtgctatggatcatttccaggacctttccgaggacgaattagacaaagttcaaaatatattcgttaagtttgacatgggt tgtgtactacaggaagagacattacataaacagatactgaaaatggcacaaaacgagctagtcatcaaaccccgctcgct gtgtgaaaaaatgcgtgaaggcattccggaagtccattatgctcaattctggtcacaaatgagtctggatcacttaactg ttttgtacgatcgtttaaaaccgacaccaaataaagtgctagcctgtctgagatctgagaccctttttctcaccgagtct cggaggcgagtgtacggatacttcaaagactttatcagaacgctaacagagcgggaactcgagattctgctacagttcat tacgggccaagcttgtgtgccaaagagattaataacagtacaattctctcaactttcaggtgcggaaagacgacccattg ctcacacatgtagcttctctatcgaacttcccgaaacgtatgaaaattacgaagattttgatgcggaattcagaatcctt ttaacctccgatatattaagccatcggtaccattaa |
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Protein
| Protein ID | pfu_aug2.0_59.1_30103.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30103.t1 MSSEIVTMGSNKILTCYRTMELKVNRHGSSNYLGLWTCKYYANAAHFNIAKKQEKLDPPSFNQINVTKPGHSNLVSGSVR CFAVPKGAGPYFYQPNIQTNWIYPTQDVGYNITIKKDVAYIKNVNCAVNASQPIFCQAREGLGPYSERSHFFPHYLCYHY TTTTVGSPVAVTTAEDNRTNLVVGLVISDDFLDTDSDIDRYISNITRGEDRTDWSQIANVYAQGDNPPISVARPRWEQNG RPSMPAMPVINLALDDTSSETEGESNTESTNPTTPSQLDENLNVPGAEGVDRNAIIKEVEICLRNLTKSLSHIQQQVEIT RENLVDNLLNIYSDPCIVEGSLHIKIIGEEGSDWGGVSRDVFTSFWSEVSLTYFLGDLVHVPYLPPHRLEEMYKFRLMGR ILSHSTAVLGYIPMAICKSTMMVTIIDATEIAEDVLLEDFLLYLDKEDRTLLQSAMDHFQDLSEDELDKVQNIFVKFDMG CVLQEETLHKQILKMAQNELVIKPRSLCEKMREGIPEVHYAQFWSQMSLDHLTVLYDRLKPTPNKVLACLRSETLFLTES RRRVYGYFKDFIRTLTERELEILLQFITGQACVPKRLITVQFSQLSGAERRPIAHTCSFSIELPETYENYEDFDAEFRIL LTSDILSHRYH |
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