Gene
| Gene Model ID | pfu_aug2.0_59.1_30104 |
|---|---|
| Locus | scaffold59.1 : 274534 ... 293796 : + |
| To GenomeBrowser | scaffold59.1:274534..293796 |
| Genes list of scaffold | scaffold59.1 |
| Synonym | pfu_aug1.0_83380.1_27829 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_59.1_30104.t1 | 2 | 1 | VWA_2 | 169 | 338 | 3.4e-19 | 69.6 | 9.0e-23 | 3.4e-19 | 69.6 |
| pfu_aug2.0_59.1_30104.t1 | 2 | 1 | VWA | 169 | 332 | 6.4e-16 | 58.5 | 2.4e-19 | 9.0e-16 | 58.0 |
| pfu_aug2.0_59.1_30104.t1 | 2 | 2 | VWA | 502 | 520 | 6.4e-16 | 58.5 | 2.6 | 9500.0 | -3.9 |
| pfu_aug2.0_59.1_30104.t1 | 2 | 2 | VWA_2 | 524 | 544 | 3.4e-19 | 69.6 | 0.44 | 1600.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_59.1_30104.t1 | gi|260827134|ref|XP_002608520.1| | hypothetical protein BRAFLDRAFT_92398 [Branchiostoma floridae] | 1.0e-23 |
| pfu_aug2.0_59.1_30104.t1 | gi|260827156|ref|XP_002608531.1| | hypothetical protein BRAFLDRAFT_92387 [Branchiostoma floridae] | 6.0e-19 |
| pfu_aug2.0_59.1_30104.t1 | gi|198434104|ref|XP_002126242.1| | PREDICTED: uncharacterized protein LOC100178306 [Ciona intestinalis] | 2.0e-18 |
| pfu_aug2.0_59.1_30104.t1 | gi|198415004|ref|XP_002120336.1| | PREDICTED: uncharacterized protein LOC100177751 [Ciona intestinalis] | 4.0e-17 |
| pfu_aug2.0_59.1_30104.t1 | gi|675851008|ref|XP_009011064.1| | hypothetical protein HELRODRAFT_167294 [Helobdella robusta] | 3.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_59.1_30104.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30104.t1 atgagttcacaggaattcaagcagtatttatcgactaatggcctgaacgatgccacaattgacaaactgttgtcggaaga tatcgaagatttgtcgacattaaaactcttaagccaagaggacatcgatggacttggattgaaaactggtcaaaaagcca agctcaggaacattatttctggtgcgcttcctgtgggtggccatccggaaatgacgccagaggttccgagtataaataac cattctagaaatgacgaaaaagctcaatttaaacctcaggcgcgacccaggacgtcactggcaaagaaagaggaggaatc tgatgatgacgacattccgcaatcctctatgagtcggaagtcatcaacgcaaaaaacgttctccaaatcaaagaaaagtg aagtggctctggattaccactgtctccttagcgaagacaagggaaaagtcgtagttgacttgtcgacggagcacttcgat gaggtcacaccacttcccgccaaaattttattattagtcgacataagcggaagtatgggtgtcaaactagggagaagtag acgatacagcaagctgtcaaaaatgagaatgtttgcgcagtccatggtggattcccttgacgacggagatttcgttggct tggtaacgtttgggaacgacgcgaacgtaatgctgcctttagaggaactcacttcaagctctaggtcccgggttcggggt gctttagagaaactagacaagacctatctgtcaacaaagaccaatctgagtgcaggactctctaaggctgtcgatgtact tcacggagtaagcaaaacacaagaagatcttctgaattacagaaacgccatcatcattttatctgatggggaaatcaacg agggaacgattcatccgggtaaattagtacacgaagtacgcgaaaaaatccggaatacttcttacggtctggacgattca caaaatcagtgggtgacgatttccgtgatcgtgaccggaaatgaagtttccgaagccatgtatatgctgtccaaattctg cagcagcgaagcattttatcatctggatatagaaaagtctgactcggaatcggacttgtttcttccggttttactgcgca agtctgcggtagcttggaatgtctcattgtatgcggagtcgttaaacggaacgcttataattaacgaggaaacgacgcag gaacacaagatacgcctgcgcgataacacgagggacggaccacgatccaagaaagcatttttattttacgacataccagc cgcgaccacgaaacatcttggtatcgctattaatatgagaagggcgcccgaggatccggaaacggaagtactgcgtttgg acgtttcgtttacaggccattcgagaaaaaggaggaagtttacgaaaactattcttcgtaaagaattttacgacgacgat cttgagaagaaagcttccgcaattacggcgaatatgatgcatgacgccagactgatatcgcaaagtgcgctaaccaaggc cgcagatcaagtaaagtccggcaatgcgagcgcatcgtccaatgagatagaaagcggaaagtccgacctgaaaaatctgc ttgacaaatatggcaaaatggcggaggactcattagaagaacaggaggaatcggttcgtccacaaattgtagcttacgct gacgtattaatgaaaaatatgcagaatctactcgacggactgacggacaccggcaatgacagcgaaagtgatgcgaaaaa ctgggtcaaaataaaggcagtagattccgcgatctcgcgagaagcccctacaatctcgtccgaggttgaggacgaagatc tatatttagcaccacgccccaatctgaaaaggatatcgggaaacttacaagggcagcttgatcatatgaacaaacaatct gccggaagaccgaagtcacgtggctcgaaactcggcacgctgcaagaatattga |
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Protein
| Protein ID | pfu_aug2.0_59.1_30104.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30104.t1 MSSQEFKQYLSTNGLNDATIDKLLSEDIEDLSTLKLLSQEDIDGLGLKTGQKAKLRNIISGALPVGGHPEMTPEVPSINN HSRNDEKAQFKPQARPRTSLAKKEEESDDDDIPQSSMSRKSSTQKTFSKSKKSEVALDYHCLLSEDKGKVVVDLSTEHFD EVTPLPAKILLLVDISGSMGVKLGRSRRYSKLSKMRMFAQSMVDSLDDGDFVGLVTFGNDANVMLPLEELTSSSRSRVRG ALEKLDKTYLSTKTNLSAGLSKAVDVLHGVSKTQEDLLNYRNAIIILSDGEINEGTIHPGKLVHEVREKIRNTSYGLDDS QNQWVTISVIVTGNEVSEAMYMLSKFCSSEAFYHLDIEKSDSESDLFLPVLLRKSAVAWNVSLYAESLNGTLIINEETTQ EHKIRLRDNTRDGPRSKKAFLFYDIPAATTKHLGIAINMRRAPEDPETEVLRLDVSFTGHSRKRRKFTKTILRKEFYDDD LEKKASAITANMMHDARLISQSALTKAADQVKSGNASASSNEIESGKSDLKNLLDKYGKMAEDSLEEQEESVRPQIVAYA DVLMKNMQNLLDGLTDTGNDSESDAKNWVKIKAVDSAISREAPTISSEVEDEDLYLAPRPNLKRISGNLQGQLDHMNKQS AGRPKSRGSKLGTLQEY |
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