Gene
| Gene Model ID | pfu_aug2.0_59.1_30106 |
|---|---|
| Locus | scaffold59.1 : 298336 ... 301623 : - |
| To GenomeBrowser | scaffold59.1:298336..301623 |
| Genes list of scaffold | scaffold59.1 |
| Synonym | pfu_aug1.0_13057.1_17948 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_59.1_30106.t1 | 1 | 1 | Homeobox | 129 | 185 | 2.4e-21 | 75.1 | 5.0e-25 | 3.7e-21 | 74.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_59.1_30106.t1 | gi|524873693|ref|XP_005093590.1| | PREDICTED: brain-specific homeobox protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_59.1_30106.t1 | gi|348518034|ref|XP_003446537.1| | PREDICTED: homeobox protein BarH-like 1-like [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_59.1_30106.t1 | gi|584010670|ref|XP_006800265.1| | PREDICTED: homeobox protein BarH-like 1-like [Neolamprologus brichardi] | 0.0 |
| pfu_aug2.0_59.1_30106.t1 | gi|499018237|ref|XP_004559914.1| | PREDICTED: homeobox protein BarH-like 1 [Maylandia zebra] | 0.0 |
| pfu_aug2.0_59.1_30106.t1 | gi|742240891|ref|XP_010904416.1| | PREDICTED: homeobox protein BarH-like 1 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_59.1_30106.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30106.t1 atgtttccgaacgaagcgaatattcaacgtcagcgaccccagacgacaacgtcatctttttacatcagagacattttaag gtctgattcaggaggtctgacgtcatcacctaagtttccaggttaccaacatccgattcaaccggaaggaactacatatt atcaaaatggatacgtgtcgtctgttccggatcagattccttcaaatccaatcccatgttccacagtaccttactctaca atctactttccatcaccgctttctaaaggtgtcccctttgatggaatgatcgatattcgatcaacggacactgttccact tccagtgtacattcggtcgcggtcaccaaacggaagcgatgctttttgccggatgaaaaaatgtcgtcgcagccgaaccg tgtttacagacttacaactcatgggcctggagaaaagatttgaatcccagaaatatttatcaaccccggataggattacc ctggcggagtctctgggattgtcacaagtacaagttaaaacctggtatcagaacaggcggatgaagtggaagaaaacggt tttggacgagtgtggagaacaagtgccgataaaaccaaagggtcgtccgaagaaagaaccaatcggaaacgattccgagc ctgctaaggaaccggaatgcagtatggagaacgcgcaatga |
|
Protein
| Protein ID | pfu_aug2.0_59.1_30106.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30106.t1 MFPNEANIQRQRPQTTTSSFYIRDILRSDSGGLTSSPKFPGYQHPIQPEGTTYYQNGYVSSVPDQIPSNPIPCSTVPYST IYFPSPLSKGVPFDGMIDIRSTDTVPLPVYIRSRSPNGSDAFCRMKKCRRSRTVFTDLQLMGLEKRFESQKYLSTPDRIT LAESLGLSQVQVKTWYQNRRMKWKKTVLDECGEQVPIKPKGRPKKEPIGNDSEPAKEPECSMENAQ |
|