Gene
| Gene Model ID | pfu_aug2.0_59.1_30110 |
|---|---|
| Locus | scaffold59.1 : 411233 ... 444792 : - |
| To GenomeBrowser | scaffold59.1:411233..444792 |
| Genes list of scaffold | scaffold59.1 |
| Synonym | pfu_aug1.0_20579.1_69349 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_59.1_30110.t1 | 4 | 1 | Ig_3 | 32 | 108 | 3.6e-22 | 78.6 | 6.3e-08 | 0.00012 | 22.5 |
| pfu_aug2.0_59.1_30110.t1 | 5 | 1 | V-set | 36 | 112 | 4.2e-18 | 65.3 | 8.1e-08 | 0.00015 | 21.6 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 1 | I-set | 37 | 121 | 0.0 | 163.9 | 3.1e-20 | 5.8e-17 | 61.3 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 1 | Ig_2 | 37 | 121 | 9.7e-37 | 124.9 | 1.7e-13 | 3.2e-10 | 39.9 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 1 | ig | 50 | 105 | 2.7e-19 | 69.0 | 1.1e-09 | 2.1e-06 | 27.7 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 1 | fn3 | 65 | 95 | 1.3e-06 | 28.4 | 0.18 | 330.0 | 1.5 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 2 | I-set | 127 | 226 | 0.0 | 163.9 | 2.2e-12 | 4.0e-09 | 36.2 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 2 | Ig_3 | 128 | 212 | 3.6e-22 | 78.6 | 1.2e-08 | 2.2e-05 | 24.8 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 2 | Ig_2 | 130 | 221 | 9.7e-37 | 124.9 | 4.8e-09 | 8.9e-06 | 25.7 |
| pfu_aug2.0_59.1_30110.t1 | 5 | 2 | V-set | 130 | 213 | 4.2e-18 | 65.3 | 3.2e-06 | 0.0059 | 16.4 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 2 | ig | 139 | 208 | 2.7e-19 | 69.0 | 0.00025 | 0.47 | 10.6 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 3 | I-set | 239 | 311 | 0.0 | 163.9 | 1.7e-08 | 3.1e-05 | 23.7 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 3 | Ig_2 | 244 | 322 | 9.7e-37 | 124.9 | 1.1e-08 | 2.1e-05 | 24.5 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 3 | Ig_3 | 251 | 304 | 3.6e-22 | 78.6 | 0.0027 | 4.9 | 7.7 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 3 | ig | 251 | 304 | 2.7e-19 | 69.0 | 0.0007 | 1.3 | 9.2 |
| pfu_aug2.0_59.1_30110.t1 | 5 | 3 | V-set | 262 | 308 | 4.2e-18 | 65.3 | 0.00015 | 0.28 | 11.1 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 2 | fn3 | 276 | 294 | 1.3e-06 | 28.4 | 5.6 | 10000.0 | -3.3 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 4 | Ig_2 | 329 | 400 | 9.7e-37 | 124.9 | 6.9e-11 | 1.3e-07 | 31.6 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 4 | Ig_3 | 333 | 399 | 3.6e-22 | 78.6 | 1.2e-08 | 2.3e-05 | 24.8 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 4 | I-set | 336 | 403 | 0.0 | 163.9 | 8.0e-13 | 1.5e-09 | 37.5 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 4 | ig | 341 | 397 | 2.7e-19 | 69.0 | 1.1e-07 | 0.00021 | 21.3 |
| pfu_aug2.0_59.1_30110.t1 | 5 | 4 | V-set | 363 | 399 | 4.2e-18 | 65.3 | 0.00032 | 0.59 | 10.0 |
| pfu_aug2.0_59.1_30110.t1 | 5 | 5 | V-set | 448 | 468 | 4.2e-18 | 65.3 | 0.12 | 220.0 | 1.7 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 3 | fn3 | 465 | 487 | 1.3e-06 | 28.4 | 0.003 | 5.6 | 7.1 |
| pfu_aug2.0_59.1_30110.t1 | 4 | 4 | fn3 | 527 | 603 | 1.3e-06 | 28.4 | 3.1e-07 | 0.00057 | 19.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_59.1_30110.t1 | gi|642920861|ref|XP_008192589.1| | PREDICTED: protein turtle isoform X4 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_59.1_30110.t1 | gi|759032839|ref|XP_011352481.1| | PREDICTED: protein turtle [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_59.1_30110.t1 | gi|642920859|ref|XP_008192588.1| | PREDICTED: protein turtle isoform X3 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_59.1_30110.t1 | gi|642920845|ref|XP_008192581.1| | PREDICTED: protein turtle isoform X1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_59.1_30110.t1 | gi|676459679|ref|XP_009055379.1| | hypothetical protein LOTGIDRAFT_104558, partial [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_59.1_30110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30110.t1 atgtggttttttagggagccaagttttgtggtgctatggatctacctgaattttcttttgattttgccggcccaggatag ttcttttccagcgcctccaagcatcgtaacaagctcccccaatacagtacgtgccgcccaggaggccacggtggagttgt tctgccgggccactggcacccccattcctgacgtggtatggtcaaaagacaacacacccctcgccaacacaaatagactc accatcgcactgaacaaggagacagtgacaatcaccaacctacaacggtcagacggaggggagtatgggtgtacattcca gaacacagtgggacaggtgtcaaagaaaatcaatcttattgtacaaggtgctgcctacattctgaataagccatcaaata tgacagtggtcaaaggtcaaagagtgaccttcacctgtggtgcctatgcattccctaacaacctaacctacagctggtat tttggcggcaccaatgtgcggaatctccctgggtacaattcccgcatcacgacacagatggatcccgcgtcaaacgatga acagctgatcgagcacctgattatatcgccggtgtacgagggagatatgggatggtatacgtgtaaaccgacgaacggag tcggagaagacccggaagcttctgcctttcttaatgtcacttatgagcctgtggtactagtagacttgatggagagtcaa gtaacctgggccctcggtttccgacaacgacttgactgcccggttgatgccaatcccccggtacatgaggtcagctggac caagaatagctatgtcgtggatttcagctcaagccgtttaacccagctcagtaacggctcgttattggtgtatcaagtac agcaggtagacgcagggagctatagctgtacacctataagtagcgtaggcagtgggatatcgtcacctctcgttcaagtt atagtacaagacccgccccgttttattatccgtccagaaccccgttacatcaaaaggagcggtgatgaggtcacaatggt ctgtgccgcagcagggaaaccgaagccagaaatactgtggagaaaggtgacaggcaaactgaattttagtggtagaattc tcctgaacgaaggaaatctgacgataacgtcactcaacaaagtggatcatggaaaatacgaatgtgaagcgtctaacgac tttgccaccattgttgtcgtcacagaactcattattcaagataccacgccacatgcaccatataacatcacgaccattcc tgattggttcagtgtacggttgtcatggataccagcttataatggtggaagcaaggcattgtttctgatatggtacagaa gtagaaacggccagacgagcgagtggttaacgatgcagcctgacaccatctacgaattcaaaatcatggcgagaaatgtt aacggcgacggaaatttcagtgacgttgttgttgttaaaactctaggtactggtgcaccccttccgacagctttacccac agatgccagcggtagcatgtactacccaactataaacaaatcttatgggccacgtcctcctcctcctaggaacgtctctg ccgccatcattacgggaggtattcgtatcggatggctgcctccgtttccgacgagcatccagttgagttattacgttatc gaactgtccatagacggagaagaatggtcgtctatagctcaatttgtcaatatatcctcaatgtcgtatatatggactaa gcacgctccacaaacgacttattatttccggatgtatacatactccattgtggcctatagtattgccagtaatgtcgcca tggttaggacacctgcctcaccagagtcaggtggtttcttcctctcacaggctgagattggagggattattggagggttg ctcttcttgttagtggctgttctgttagctattattggagtgatttgtagcaagcgaagagataaacgtacagagaaata cggaaatgtaaagtatttaggacctgcagacgaagttgactctatgccaaattatagaatggaagattcggcagaatggg gtggccgggacacatctggaggaacagacgctttaaggcaggacttcatcgctaacggaatattccttgttccgcagacc aaaaagagtaatggggatttggacatgatgcatcatgattatttggcagaaagccaactttatcccccgaatgactatat ttataactcagacaagggttatcgtgtgccatacggagggggccatgactcatatgacccacttctcaaggacgatgatt ttatgccgaggtcatatgatcgatcgaggtcatatgatctttcaaggtcatatgatcgttcaaggtcacatgatcgctca aggtcaaggacaagtgggtatacaaattcatttcatagtgagaaggataatttgttaggaagtgggagaagtcgttttcc tgaacaatcttacatgtcaggagcatccagtgttagaagaagggatacttcccatgatggatatagagacagatctccaa atgatggttaccatggatacggtagtgatcgccatggttaccataacaattattctgatcatcatccatatgtaaatcaa tcatttccacgatcatcgtcttcatccaaacctagtttccattgtgacgttaatccgaaagattttttaccacctagacc tccgatcggtgataaagccaatggtttcctaccagaacgctataaccatctctccatgcctaaacaggagaaaaatgaaa attatgatgacgaaaacggttttgttccgacacgccctcccctgccagtggagtacagggattcatcacttccctactcc cctgggcagcaggatcagaccacgcgtttttctcatggactggagagaccgaattatggaccaatggggcataaagaacc ctcgtatgaaaacattccagccgatttagacgatgtttttgttccgtcatttgatcatcactcaccatcacatcattatc gcccgggatttcctcgtcatagttccatgaagccttcgtatcagacgtatctcactggagatcctgaggaagaggatagc tctactcaacccttcgttgctaaagatatcagttccgttttaccttcatttactgaatcttctattcaaccctatccatc ctactacgaagatgaaccaactttggtcaatagacttgaaaagccaaagtggaacattccatttgattcattaaggggag atcaggttgctccagattatcaaagaaattccagaccacagtcccgttcaaatgatttgcgtccaagttccatgaagcct tcgtatcagacgtatctcactggagatcctgaggaagaggatagctctactcaacccttcgttgctaaagatatcagttc cgttttaccttcatttactgaatcttctattcaaccctatccatcctactacgaagatgaaccaactttggtcaatagac ttgaaaagccaaagtggaacattccatttgattcattaaggggagatcaggttgctccagattatcaaagaaattccaga ccacagtcccgttcaaatgatttgcgtccaaggtcaaggtcatctgactctagacctcaatctcgttttggctccttgaa taatacggtgcgggaaagaccatcatcaagtaatggaagtactcttgaaaaattgccttcttacactagggaccatttgc aaggtacagtggataagatcagaaaaggcccccgagcccgtcgggcaaagtctgcaggaaggcttccgtcctcggaatat aacggtgacattccggcacaagttgtacccagggggcctcatgtttcagacagtgatgtgggttacggtagatatggtaa tgatggaggtgtacatccagataattattcaaacgacgtagagccatataaatcaaagcgtgacagtcgatcaagtgtga atagttccggtaggggaagtatggctgggaggtcacgtcatgtgactgagccgggtaaacctccgtatcttgatctcact cctgactcactgagtagtggactcggcagtcgtaataactcacatgtgacaggttctagtggtaactcgcgcattccgta cgctcgtaaaagtgcttctgtagactcaatgggtaatccccttgaccctgatatcagtgaggactcatccccgttcttag ataatagtgctagaaaagatacctccgcagacgatcagtatgagtttgactcgctccaggcactggaaaatgatctcata aacacgctccgcaagcatccaatcagcagccaggatgacgaactacttaacgcaatacaaacgggtctaagcacatctga tttctatgacgatctttacccgaagccatcacggcagagccgttacgaagattccgatgcgcgatttgagagactccgag aggaatttcaccattttcaacgattgcagcaggagcgtcaccatcaggttcggcttgcgatggacagtgatatgttatga |
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Protein
| Protein ID | pfu_aug2.0_59.1_30110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30110.t1 MWFFREPSFVVLWIYLNFLLILPAQDSSFPAPPSIVTSSPNTVRAAQEATVELFCRATGTPIPDVVWSKDNTPLANTNRL TIALNKETVTITNLQRSDGGEYGCTFQNTVGQVSKKINLIVQGAAYILNKPSNMTVVKGQRVTFTCGAYAFPNNLTYSWY FGGTNVRNLPGYNSRITTQMDPASNDEQLIEHLIISPVYEGDMGWYTCKPTNGVGEDPEASAFLNVTYEPVVLVDLMESQ VTWALGFRQRLDCPVDANPPVHEVSWTKNSYVVDFSSSRLTQLSNGSLLVYQVQQVDAGSYSCTPISSVGSGISSPLVQV IVQDPPRFIIRPEPRYIKRSGDEVTMVCAAAGKPKPEILWRKVTGKLNFSGRILLNEGNLTITSLNKVDHGKYECEASND FATIVVVTELIIQDTTPHAPYNITTIPDWFSVRLSWIPAYNGGSKALFLIWYRSRNGQTSEWLTMQPDTIYEFKIMARNV NGDGNFSDVVVVKTLGTGAPLPTALPTDASGSMYYPTINKSYGPRPPPPRNVSAAIITGGIRIGWLPPFPTSIQLSYYVI ELSIDGEEWSSIAQFVNISSMSYIWTKHAPQTTYYFRMYTYSIVAYSIASNVAMVRTPASPESGGFFLSQAEIGGIIGGL LFLLVAVLLAIIGVICSKRRDKRTEKYGNVKYLGPADEVDSMPNYRMEDSAEWGGRDTSGGTDALRQDFIANGIFLVPQT KKSNGDLDMMHHDYLAESQLYPPNDYIYNSDKGYRVPYGGGHDSYDPLLKDDDFMPRSYDRSRSYDLSRSYDRSRSHDRS RSRTSGYTNSFHSEKDNLLGSGRSRFPEQSYMSGASSVRRRDTSHDGYRDRSPNDGYHGYGSDRHGYHNNYSDHHPYVNQ SFPRSSSSSKPSFHCDVNPKDFLPPRPPIGDKANGFLPERYNHLSMPKQEKNENYDDENGFVPTRPPLPVEYRDSSLPYS PGQQDQTTRFSHGLERPNYGPMGHKEPSYENIPADLDDVFVPSFDHHSPSHHYRPGFPRHSSMKPSYQTYLTGDPEEEDS STQPFVAKDISSVLPSFTESSIQPYPSYYEDEPTLVNRLEKPKWNIPFDSLRGDQVAPDYQRNSRPQSRSNDLRPSSMKP SYQTYLTGDPEEEDSSTQPFVAKDISSVLPSFTESSIQPYPSYYEDEPTLVNRLEKPKWNIPFDSLRGDQVAPDYQRNSR PQSRSNDLRPRSRSSDSRPQSRFGSLNNTVRERPSSSNGSTLEKLPSYTRDHLQGTVDKIRKGPRARRAKSAGRLPSSEY NGDIPAQVVPRGPHVSDSDVGYGRYGNDGGVHPDNYSNDVEPYKSKRDSRSSVNSSGRGSMAGRSRHVTEPGKPPYLDLT PDSLSSGLGSRNNSHVTGSSGNSRIPYARKSASVDSMGNPLDPDISEDSSPFLDNSARKDTSADDQYEFDSLQALENDLI NTLRKHPISSQDDELLNAIQTGLSTSDFYDDLYPKPSRQSRYEDSDARFERLREEFHHFQRLQQERHHQVRLAMDSDML |
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