Gene
| Gene Model ID | pfu_aug2.0_59.1_30112 |
|---|---|
| Locus | scaffold59.1 : 550368 ... 569839 : - |
| To GenomeBrowser | scaffold59.1:550368..569839 |
| Genes list of scaffold | scaffold59.1 |
| Synonym | pfu_aug1.0_8667.1_17358 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_59.1_30112.t1 | 1 | 1 | adh_short | 137 | 252 | 1.6e-21 | 76.9 | 7.7e-25 | 2.9e-21 | 76.1 |
| pfu_aug2.0_59.1_30112.t1 | 1 | 1 | adh_short_C2 | 140 | 327 | 7.8e-27 | 94.5 | 2.7e-30 | 9.9e-27 | 94.2 |
Transcript
| Transcript ID | pfu_aug2.0_59.1_30112.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30112.t1 atgtcggttttgaaggataaagttgtaataataacaggtatgtacatgtttaaattggcggctcaaattccttggttttc tgtaagacaaaggagaggatctccaacaacactcggttgcggcacatacagcaaaactccaaaacacccaatgcaaaaag acagagcaggcactcagagacgtaaaaaggacaaggaacaccaacaacaacacaaacatcaaacacaaaagacaacacat aaaccaacgagaccaaatggcaatcggtgccgacttaggacggccatctgccacgcaagtagcagagggtgtggttatcc tggattacgtgcgcacaatcctcccacttttcccagaggtctcttagaacgcacaaatgtggtgttaaataatctcctca ctattttatacacagtaggcgatataactcaagatgatgtgaggaaaaagctcatcgaaaatactgttactgcgtttggg tcgatagatgtactggtcaacaatgctggtatacttaaggtagtaccagtctcagagatggaggacgatgattttcgtcg ggtagtagacgtgaaccagactgcaccttttttgcttacaaaattggcgatccctcatctcaagaagagcaaaggtggca acattctgaacatatcaagtattaacggccatatgaatccagtcgttggttactcagcatattctatgaccaaagctgct gttaatatgttcacaaaatatttagcaatagaattggctccatttggcatacgtgtcaatacaataagtcctggacttgt caacacaaatgttttggaagctttgatacctgacgaacagaaaaggaatgatatatacgacatggctgcgactggtattc ctttaggccagctgggaactcctaaggatatagctgaggttgtggctttcctagtctcagcaaaatggattactggagaa aatatcgttgtcgatggtggaagccaactagctttcaaacctcccgatattgagtga |
|
Protein
| Protein ID | pfu_aug2.0_59.1_30112.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30112.t1 MSVLKDKVVIITGMYMFKLAAQIPWFSVRQRRGSPTTLGCGTYSKTPKHPMQKDRAGTQRRKKDKEHQQQHKHQTQKTTH KPTRPNGNRCRLRTAICHASSRGCGYPGLRAHNPPTFPRGLLERTNVVLNNLLTILYTVGDITQDDVRKKLIENTVTAFG SIDVLVNNAGILKVVPVSEMEDDDFRRVVDVNQTAPFLLTKLAIPHLKKSKGGNILNISSINGHMNPVVGYSAYSMTKAA VNMFTKYLAIELAPFGIRVNTISPGLVNTNVLEALIPDEQKRNDIYDMAATGIPLGQLGTPKDIAEVVAFLVSAKWITGE NIVVDGGSQLAFKPPDIE |
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