Gene
| Gene Model ID | pfu_aug2.0_59.1_30113 |
|---|---|
| Locus | scaffold59.1 : 568330 ... 588352 : + |
| To GenomeBrowser | scaffold59.1:568330..588352 |
| Genes list of scaffold | scaffold59.1 |
| Synonym | pfu_aug1.0_3944.1_37749 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_59.1_30113.t2 | 2 | 1 | BTB | 18 | 113 | 4.0e-25 | 87.9 | 7.6e-28 | 1.3e-24 | 86.3 |
| pfu_aug2.0_59.1_30113.t2 | 2 | 1 | DUF3342 | 24 | 114 | 1.3e-08 | 34.3 | 1.1e-09 | 1.9e-06 | 27.2 |
| pfu_aug2.0_59.1_30113.t2 | 2 | 1 | BACK | 96 | 112 | 9.5e-35 | 118.5 | 3.9 | 6400.0 | -3.0 |
| pfu_aug2.0_59.1_30113.t2 | 2 | 2 | DUF3342 | 112 | 153 | 1.3e-08 | 34.3 | 0.0058 | 9.6 | 5.2 |
| pfu_aug2.0_59.1_30113.t2 | 2 | 2 | BACK | 119 | 220 | 9.5e-35 | 118.5 | 1.1e-37 | 1.8e-34 | 117.6 |
| pfu_aug2.0_59.1_30113.t2 | 2 | 2 | BTB | 119 | 145 | 4.0e-25 | 87.9 | 3.5 | 5700.0 | -2.7 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 1 | Kelch_4 | 262 | 301 | 1.4e-30 | 104.7 | 1.6e-06 | 0.0026 | 17.5 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 1 | Kelch_1 | 262 | 301 | 0.0 | 293.3 | 6.0e-14 | 9.9e-11 | 41.0 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 1 | Kelch_5 | 265 | 289 | 9.0e-12 | 44.6 | 0.033 | 55.0 | 3.8 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 1 | Kelch_6 | 266 | 303 | 0.0 | 162.8 | 7.4e-09 | 1.2e-05 | 25.2 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 1 | Kelch_2 | 267 | 301 | 3.69943e-43 | 143.7 | 0.0003 | 0.49 | 10.2 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 1 | Kelch_3 | 269 | 301 | 4.4e-23 | 80.8 | 0.0088 | 15.0 | 5.9 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 2 | Kelch_2 | 305 | 348 | 3.69943e-43 | 143.7 | 2.0e-07 | 0.00032 | 20.3 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 2 | Kelch_5 | 305 | 328 | 9.0e-12 | 44.6 | 0.00025 | 0.41 | 10.6 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 2 | Kelch_1 | 305 | 349 | 0.0 | 293.3 | 9.8e-15 | 1.6e-11 | 43.5 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 2 | Kelch_6 | 308 | 349 | 0.0 | 162.8 | 1.9e-09 | 3.1e-06 | 27.1 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 2 | Kelch_4 | 310 | 348 | 1.4e-30 | 104.7 | 7.3e-06 | 0.012 | 15.3 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 2 | Kelch_3 | 315 | 352 | 4.4e-23 | 80.8 | 7.7e-05 | 0.13 | 12.4 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 3 | Kelch_5 | 352 | 383 | 9.0e-12 | 44.6 | 0.01 | 16.0 | 5.5 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 3 | Kelch_1 | 352 | 395 | 0.0 | 293.3 | 3.6e-17 | 6.0e-14 | 51.3 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 3 | Kelch_6 | 352 | 396 | 0.0 | 162.8 | 1.4e-10 | 2.2e-07 | 30.7 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 3 | Kelch_2 | 355 | 394 | 3.69943e-43 | 143.7 | 4.0e-11 | 6.6e-08 | 32.0 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 3 | Kelch_4 | 356 | 395 | 1.4e-30 | 104.7 | 2.8e-06 | 0.0046 | 16.6 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 3 | Kelch_3 | 362 | 402 | 4.4e-23 | 80.8 | 5.5e-07 | 0.00091 | 19.3 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 4 | Kelch_1 | 398 | 442 | 0.0 | 293.3 | 7.0e-17 | 1.1e-13 | 50.4 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 4 | Kelch_6 | 399 | 446 | 0.0 | 162.8 | 9.5e-09 | 1.6e-05 | 24.8 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 4 | Kelch_5 | 401 | 434 | 9.0e-12 | 44.6 | 0.05 | 83.0 | 3.2 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 4 | Kelch_4 | 402 | 442 | 1.4e-30 | 104.7 | 1.5e-05 | 0.025 | 14.3 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 4 | Kelch_2 | 404 | 443 | 3.69943e-43 | 143.7 | 1.1e-08 | 1.7e-05 | 24.3 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 4 | Kelch_3 | 409 | 447 | 4.4e-23 | 80.8 | 0.0018 | 3.0 | 8.1 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 5 | Kelch_2 | 446 | 489 | 3.69943e-43 | 143.7 | 4.9e-11 | 8.1e-08 | 31.7 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 5 | Kelch_1 | 446 | 490 | 0.0 | 293.3 | 3.1e-19 | 5.1e-16 | 57.9 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 5 | Kelch_6 | 446 | 493 | 0.0 | 162.8 | 5.4e-12 | 9.0e-09 | 35.1 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 5 | Kelch_5 | 451 | 478 | 9.0e-12 | 44.6 | 0.00032 | 0.53 | 10.3 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 5 | Kelch_4 | 452 | 489 | 1.4e-30 | 104.7 | 1.8e-06 | 0.003 | 17.2 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 5 | Kelch_3 | 456 | 499 | 4.4e-23 | 80.8 | 2.6e-06 | 0.0043 | 17.1 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 6 | Kelch_2 | 492 | 537 | 3.69943e-43 | 143.7 | 3.3e-08 | 5.5e-05 | 22.7 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 6 | Kelch_1 | 492 | 536 | 0.0 | 293.3 | 6.4e-17 | 1.1e-13 | 50.5 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 6 | Kelch_4 | 493 | 528 | 1.4e-30 | 104.7 | 5.5e-06 | 0.009 | 15.7 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 6 | Kelch_5 | 493 | 525 | 9.0e-12 | 44.6 | 0.00049 | 0.81 | 9.7 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 6 | Kelch_6 | 496 | 536 | 0.0 | 162.8 | 4.0e-06 | 0.0066 | 16.5 |
| pfu_aug2.0_59.1_30113.t2 | 6 | 6 | Kelch_3 | 504 | 531 | 4.4e-23 | 80.8 | 0.00037 | 0.61 | 10.3 |
Transcript
| Transcript ID | pfu_aug2.0_59.1_30113.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30113.t1 atgcacacgtccgtccgtccgtccgttcgtcccacctgtggtatccggacatttaaaggaaaactgttacaggtcggaga gaggaaattcactgcacataggattgtactggctgctagtatcccgtactttcatgccatgtttacacatgatatggtgg aatctaaacaagatgaaatcgcaatgcaaggaattgatccaaatgcattagagtcccttgtgaactttgcctacaatggc agggtacagattgactcccataatgtagagagccttctggtagcctccagtttcctccatttacaggctgttaaggaggc gtgctgctccttcctgcaacacagcttacatccccagaacgttctcggcatcaggaactttggtgaccagtacatgtgtc ctcagctagtggaggccaccaacaagtacatacagaaacacttcagggaggtcatgttaacagaggagttcctgagcctt gacagatacgacgtactcgatataatatcacgggacgaactcaacgtcaagtcagaggagcaggtgtttgaagccattct taagtgggtgaagaaagacgaggaggaaaggaaaggtcacctgccggagttactagtcaaggtcagattgcccttactga ccccacattatctgtctgacaggatagctacagaggatctcatcaaaagttcactcaagtgcagagatttgttagacgaa gccaaggattatcacctgatgccagagaggcgcccactgttacagacattcaaaacgaggccccgatgttgtactgatgt accaggacttatatacgctgtgggaggactaacatcatcaggggactccctaagtacagttgagtgttatgacccgttgt tgaacaagtggagcccggcagaggacatgaaaacagtgaggagccgagtaggtgtagccgtccttaatgggagtctgtat gcgataggaggatacgatggacatgaaagactcagcactgtggaagtattcaaccaggaaaacatcaagtggaaaaaagt cacgtgtatgaactgtaaaaggagtgctcttggatcagtgtcgttaaacaggaagttgtacgtgtgtggtgggtacgacg gagtatcgtctctcagatctgtggaaatgtatgatcctgagaaaaacacgtgggtgttgttagccaatatgttgaagcat agaagtgcagcaggagttgcctgccttgatggggagatcttcgcttgtggaggtcatgatggtctatcaatctttgattc ggttgaaaagtacaatacaactacaaacgaatggaaaaatatttcccctatgaagacaaagagatgtcgtctcggagttg cagcattaaacggtaaactctacgcagctggaggctacgatgggtctatattcctgaacagtgtagaatgttacgatcca gagaaagagcaatgggaatatataaaacccatgcagtgccgaagaagtcgtgttgctatggttgctacgtatggtagatt atacgccataggaggatacgacggaattacgaatctggactctgtggagatgtacgaccccaagaaagactgttggagtt atgtgcagaaaatgtgtgcacatgaaggtggggtgggggtaggtgtggtgccagtggagccgtcacatttaaatagagat gtgtga |
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| Transcript ID | pfu_aug2.0_59.1_30113.t2 |
| Definition | - |
>pfu_aug2.0_59.1_30113.t2 atggacggaggagttatccccgaaaaaccttcaaaatcgtccggaaactgttccaacaccagtagagtcggagagaggaa attcactgcacataggattgtactggctgctagtatcccgtactttcatgccatgtttacacatgatatggtggaatcta aacaagatgaaatcgcaatgcaaggaattgatccaaatgcattagagtcccttgtgaactttgcctacaatggcagggta cagattgactcccataatgtagagagccttctggtagcctccagtttcctccatttacaggctgttaaggaggcgtgctg ctccttcctgcaacacagcttacatccccagaacgttctcggcatcaggaactttggtgaccagtacatgtgtcctcagc tagtggaggccaccaacaagtacatacagaaacacttcagggaggtcatgttaacagaggagttcctgagccttgacaga tacgacgtactcgatataatatcacgggacgaactcaacgtcaagtcagaggagcaggtgtttgaagccattcttaagtg ggtgaagaaagacgaggaggaaaggaaaggtcacctgccggagttactagtcaaggtcagattgcccttactgaccccac attatctgtctgacaggatagctacagaggatctcatcaaaagttcactcaagtgcagagatttgttagacgaagccaag gattatcacctgatgccagagaggcgcccactgttacagacattcaaaacgaggccccgatgttgtactgatgtaccagg acttatatacgctgtgggaggactaacatcatcaggggactccctaagtacagttgagtgttatgacccgttgttgaaca agtggagcccggcagaggacatgaaaacagtgaggagccgagtaggtgtagccgtccttaatgggagtctgtatgcgata ggaggatacgatggacatgaaagactcagcactgtggaagtattcaaccaggaaaacatcaagtggaaaaaagtcacgtg tatgaactgtaaaaggagtgctcttggatcagtgtcgttaaacaggaagttgtacgtgtgtggtgggtacgacggagtat cgtctctcagatctgtggaaatgtatgatcctgagaaaaacacgtgggtgttgttagccaatatgttgaagcatagaagt gcagcaggagttgcctgccttgatggggagatcttcgcttgtggaggtcatgatggtctatcaatctttgattcggttga aaagtacaatacaactacaaacgaatggaaaaatatttcccctatgaagacaaagagatgtcgtctcggagttgcagcat taaacggtaaactctacgcagctggaggctacgatgggtctatattcctgaacagtgtagaatgttacgatccagagaaa gagcaatgggaatatataaaacccatgcagtgccgaagaagtcgtgttgctatggttgctacgtatggtagattatacgc cataggaggatacgacggaattacgaatctggactctgtggagatgtacgaccccaagaaagactgttggagttatgtgc agaaaatgtgtgcacatgaaggtggggtgggggtaggtgtggtgccagtggagccgtcacatttaaatagagatgtgtga |
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Protein
| Protein ID | pfu_aug2.0_59.1_30113.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_59.1_30113.t1 MHTSVRPSVRPTCGIRTFKGKLLQVGERKFTAHRIVLAASIPYFHAMFTHDMVESKQDEIAMQGIDPNALESLVNFAYNG RVQIDSHNVESLLVASSFLHLQAVKEACCSFLQHSLHPQNVLGIRNFGDQYMCPQLVEATNKYIQKHFREVMLTEEFLSL DRYDVLDIISRDELNVKSEEQVFEAILKWVKKDEEERKGHLPELLVKVRLPLLTPHYLSDRIATEDLIKSSLKCRDLLDE AKDYHLMPERRPLLQTFKTRPRCCTDVPGLIYAVGGLTSSGDSLSTVECYDPLLNKWSPAEDMKTVRSRVGVAVLNGSLY AIGGYDGHERLSTVEVFNQENIKWKKVTCMNCKRSALGSVSLNRKLYVCGGYDGVSSLRSVEMYDPEKNTWVLLANMLKH RSAAGVACLDGEIFACGGHDGLSIFDSVEKYNTTTNEWKNISPMKTKRCRLGVAALNGKLYAAGGYDGSIFLNSVECYDP EKEQWEYIKPMQCRRSRVAMVATYGRLYAIGGYDGITNLDSVEMYDPKKDCWSYVQKMCAHEGGVGVGVVPVEPSHLNRD V |
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| Protein ID | pfu_aug2.0_59.1_30113.t2 |
| Definition | - |
>pfu_aug2.0_59.1_30113.t2 MDGGVIPEKPSKSSGNCSNTSRVGERKFTAHRIVLAASIPYFHAMFTHDMVESKQDEIAMQGIDPNALESLVNFAYNGRV QIDSHNVESLLVASSFLHLQAVKEACCSFLQHSLHPQNVLGIRNFGDQYMCPQLVEATNKYIQKHFREVMLTEEFLSLDR YDVLDIISRDELNVKSEEQVFEAILKWVKKDEEERKGHLPELLVKVRLPLLTPHYLSDRIATEDLIKSSLKCRDLLDEAK DYHLMPERRPLLQTFKTRPRCCTDVPGLIYAVGGLTSSGDSLSTVECYDPLLNKWSPAEDMKTVRSRVGVAVLNGSLYAI GGYDGHERLSTVEVFNQENIKWKKVTCMNCKRSALGSVSLNRKLYVCGGYDGVSSLRSVEMYDPEKNTWVLLANMLKHRS AAGVACLDGEIFACGGHDGLSIFDSVEKYNTTTNEWKNISPMKTKRCRLGVAALNGKLYAAGGYDGSIFLNSVECYDPEK EQWEYIKPMQCRRSRVAMVATYGRLYAIGGYDGITNLDSVEMYDPKKDCWSYVQKMCAHEGGVGVGVVPVEPSHLNRDV |
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