Gene
| Gene Model ID | pfu_aug2.0_5914.1_16154 |
|---|---|
| Locus | scaffold5914.1 : 438 ... 8961 : + |
| To GenomeBrowser | scaffold5914.1:438..8961 |
| Genes list of scaffold | scaffold5914.1 |
| Synonym | pfu_aug1.0_4036.1_52170 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosome biogenesis protein bop1 | GO:0000463 GO:0000466 GO:0005654 GO:0016740 GO:0030687 GO:0043021 GO:0051726 GO:0070545 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5914.1_16154.t2 | 2 | 1 | BOP1NT | 62 | 98 | 0.0 | 363.7 | 3.0 | 15000.0 | -4.6 |
| pfu_aug2.0_5914.1_16154.t2 | 2 | 2 | BOP1NT | 147 | 411 | 0.0 | 363.7 | 0.0 | 0.0 | 363.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5914.1_16154.t2 | gi|241564930|ref|XP_002401969.1| | block of proliferation protein, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5914.1_16154.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5914.1_16154.t1 atggattttacaaaattaaaaggcaaggcaaaagttgatgatccttcatccgagtctgagtctgaagaaagtgtatattc aggactagaggaggaaccagatactacaggagatgaggaaagtagtaatgaagaaacgaagaatacagtagatgattatg aagacgatgatgatgatgaagaggatgatgaaaatgaagaagaaagtatcgatgaagatgaagatcaaaggaaagacatt caaaagttagaggaggatgaaactttaaatgatgataaagatcatgacatagttatagaaaatatcaaatcaatgaacgt aaagtcagtgccaaaaaagcaggaggggataactctgtcagtgccggatgagtacgactatgattcttcagatgaggagg atatccgtaacacagttggaaacattccgttagaatggtacagggactacgctcacatcggctacgacatagagggtcgg aaactgatcaaacctaagaaaagtgacgaattagatgaattcttaaacaagatggacaatccagattattggaggacggt aacagacaaacttaccgggcagaaaatactactgagtgaaaaagacctcaacctcatcaaaaatatacaatcacaccaac tctatgacaaccaacaggaaacttacgagccatgggtagatttcttcacacatgagaaaatgattcatcccgtcacaaac aggccagaacataaacggagcttcataccgtctaaatgggaaagacttaaggtaggacagatggtccacgccctgaagat gggctggatgaaaccgacgaagaagaagacagaagatgaagaagacgaggaagataaacacaaatactacatgttgtgga aggatgatgaagagaagtctgagacaaagaggtacaggtcccacataccagcacccaaaatggcgttaccggggcacgag gaatcatataaccctccaccggagtatctacccactaaggaagaggaacaacaatggctcgatgctgacccagaggatcg taaaagaaactttctacctcagaaatactcgagcctgcgtctggtaacggcttataaacgattcatcaacgagagatttg agagatgtctcgacttgtatttatgtcctagacaacagaggataaagatgaacgttaacccagaggacctgatacccaaa ctacctaaacccagagatttacaacctttcccaactgtacaggctataatatacaaaggccatacagatatgataaggag tatatcagtagatccctcaggtcaatggctggcttcag |
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| Transcript ID | pfu_aug2.0_5914.1_16154.t2 |
| Definition | - |
>pfu_aug2.0_5914.1_16154.t2 atggattttacaaaattaaaaggcaaggcaaaagttgatgatccttcatccgagtctgagtctgaagaaagtgtatattc aggactagaggaggaaccagatactacaggagatgaggaaagtagtaatgaagaaacgaagaatacagtagatgattatg aagacgatgatgatgatgaagaggatgatgaaaatgaagaagaaagtatcgatgaagatgaagatcaaaggaaagacatt caaaagttagaggaggatgaaactttaaatgatgataaagatcatgacatagttatagaaaatatcaaatcaatgaacgt aaagtcagtgccaaaaaagcaggaggggataactctgtcagtgccggatgagtacgactatgattcttcagatgaggagg atatccgtaacacagttggaaacattccgttagaatggtacagggactacgctcacatcggctacgacatagagggtcgg aaactgatcaaacctaagaaaagtgacgaattagatgaattcttaaacaagatggacaatccagattattggaggacggt aacagacaaacttaccgggcagaaaatactactgagtgaaaaagacctcaacctcatcaaaaatatacaatcacaccaac tctatgacaaccaacaggaaacttacgagccatgggtagatttcttcacacatgagaaaatgattcatcccgtcacaaac aggccagaacataaacggagcttcataccgtctaaatgggaaagacttaaggtaggacagatggtccacgccctgaagat gggctggatgaaaccgacgaagaagaagacagaagatgaagaagacgaggaagataaacacaaatactacatgttgtgga aggatgatgaagagaagtctgagacaaagaggtacaggtcccacataccagcacccaaaatggcgttaccggggcacgag gaatcatataaccctccaccggagtatctacccactaaggaagaggaacaacaatggctcgatgctgacccagaggatcg taaaagaaactttctacctcagaaatactcgagcctgcgtctggtaacggcttataaacgattcatcaacgagagatttg agagatgtctcgacttgtatttatgtcctagacaacagaggataaagatgaacgttaacccagaggacctgatacccaaa ctacctaaacccagagatttacaacctttcccaactgtacaggctatagtgagtatgatactattgtgtataatgtaa |
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Protein
| Protein ID | pfu_aug2.0_5914.1_16154.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5914.1_16154.t1 MDFTKLKGKAKVDDPSSESESEESVYSGLEEEPDTTGDEESSNEETKNTVDDYEDDDDDEEDDENEEESIDEDEDQRKDI QKLEEDETLNDDKDHDIVIENIKSMNVKSVPKKQEGITLSVPDEYDYDSSDEEDIRNTVGNIPLEWYRDYAHIGYDIEGR KLIKPKKSDELDEFLNKMDNPDYWRTVTDKLTGQKILLSEKDLNLIKNIQSHQLYDNQQETYEPWVDFFTHEKMIHPVTN RPEHKRSFIPSKWERLKVGQMVHALKMGWMKPTKKKTEDEEDEEDKHKYYMLWKDDEEKSETKRYRSHIPAPKMALPGHE ESYNPPPEYLPTKEEEQQWLDADPEDRKRNFLPQKYSSLRLVTAYKRFINERFERCLDLYLCPRQQRIKMNVNPEDLIPK LPKPRDLQPFPTVQAIIYKGHTDMIRSISVDPSGQWLAS |
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| Protein ID | pfu_aug2.0_5914.1_16154.t2 |
| Definition | - |
>pfu_aug2.0_5914.1_16154.t2 MDFTKLKGKAKVDDPSSESESEESVYSGLEEEPDTTGDEESSNEETKNTVDDYEDDDDDEEDDENEEESIDEDEDQRKDI QKLEEDETLNDDKDHDIVIENIKSMNVKSVPKKQEGITLSVPDEYDYDSSDEEDIRNTVGNIPLEWYRDYAHIGYDIEGR KLIKPKKSDELDEFLNKMDNPDYWRTVTDKLTGQKILLSEKDLNLIKNIQSHQLYDNQQETYEPWVDFFTHEKMIHPVTN RPEHKRSFIPSKWERLKVGQMVHALKMGWMKPTKKKTEDEEDEEDKHKYYMLWKDDEEKSETKRYRSHIPAPKMALPGHE ESYNPPPEYLPTKEEEQQWLDADPEDRKRNFLPQKYSSLRLVTAYKRFINERFERCLDLYLCPRQQRIKMNVNPEDLIPK LPKPRDLQPFPTVQAIVSMILLCIM |
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