Gene
| Gene Model ID | pfu_aug2.0_5917.1_26118 |
|---|---|
| Locus | scaffold5917.1 : 14734 ... 23264 : - |
| To GenomeBrowser | scaffold5917.1:14734..23264 |
| Genes list of scaffold | scaffold5917.1 |
| Synonym | pfu_aug1.0_192.1_22051 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| polycystic kidney disease protein 1-like 2-like | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5917.1_26118.t1 | 3 | 1 | PKD_channel | 135 | 179 | 0.0 | 332.5 | 0.081 | 600.0 | -1.5 |
| pfu_aug2.0_5917.1_26118.t1 | 3 | 2 | PKD_channel | 263 | 274 | 0.0 | 332.5 | 0.78 | 5800.0 | -4.7 |
| pfu_aug2.0_5917.1_26118.t1 | 3 | 3 | PKD_channel | 298 | 737 | 0.0 | 332.5 | 0.0 | 0.0 | 332.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5917.1_26118.t1 | gi|676429257|ref|XP_009045541.1| | hypothetical protein LOTGIDRAFT_110316, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_5917.1_26118.t1 | gi|675873392|ref|XP_009022256.1| | hypothetical protein HELRODRAFT_84161, partial [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5917.1_26118.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5917.1_26118.t1 ttgttcatcagttttgcaagcaccatgttggtttttccagttaacttcattttgatgacattcttccgaaaatgtcgacc aaagaaaaacacaataatgcagacgaatcagcatatgccgaaacgtgggaaatggaaaacaattaatggctcccagatct tcggaagatctgcaaaaagaggattatggaaaaggtttaaagattctgtatctgatatcattaatttccgacaaagacag aaatatgcaaatgagatagatcctcaggaggacgatacccctgtacctgtgatatcgggagttcccgtggacgaaaaatt tatgaaaaagaaaaagaagaagaagtcctcgttgccacattggtgtgtttacatagcctggggactttcatggcttagca taataacggctggattctttacaattctgtacagcatgcagtggggaaaagaaaaggctaacgaatggttgatgaccttc cttatgtccttctttcagtccgtcattgttgtacaacccatcaaggtcatatgcattgttgctttcatcgcctgcatttt gaagaaacctgaaattgatgaagaggatacaaatgaagatcttaacaatgttattgccgcccatgatgaagaattcctga acaaggactcacgcactattgatgacattgcagagaggcgtaaaaaagccaatagtgagtttcagccaccagatcccgaa gaacttgaaacggcaaggaaacaaagattgctggagatagaaatggagatggtcatcagagagatcatcgtatatctctt ctttgtccttatcctcttcttcctttcatatcaacaacgagattcagactcttttatatttgcagagaatctgaaagcta catttgacaatggattcagcaatattcagacagcagatcagtactggaaatggttggaaaccaagttcttaccaaatctt tatgctacaaattatgctaacggtacagaaatacgtagatggtgggaaaagcgatgtatcagtgacatggagtcccgtcg aattggtataccacggctgagacaactacgaattaagccagacacatgtgttgtcaacaaaagacttcaaacgttgatat ttcattgccgagatgagtatggctggagcgacgatgacaccaagccttatctccctggctgggttaaaccccctccagaa aaccttactgccatggtggaagacgaagatccctcaccttgggtttatcaaaactccctcaagctgaggaacgccccata catggcaaccatcacttcgtacaagggtggtggttacgctgttatgtttgaacgagattacctaagaaacaagaagatgc tggagggcttgaaaaaccagatatggctagatgagcatgctagaggtgtattcttagaatttactgtatacaacccaaat atcaacctttttggatcagttatcatggtcacggaatttatgtcaagtggtggcgctgttgctagacaagaagtcaaggt tttcaggttgttgagctatgttggaggacttggaattttggtactgatatttgaagtgatatacgccctcttcacgttgt atttctttatacggtgtgtaagaaaagtaaagaaggagaagtgtaaatatttcaaatccttctgggacatattggagttt gtactgctggtttttgcagtcgctgtcatcgctatgtacgttttcaaacagctgttgacgtcagtggccctcaaagcact tcaggatatagaaaaagctgactatgtcaatttccagtccttggctctgtacgatgagatgttcggttggatgtgcgcca ttgttgtatttctagctacaatccaattcttgaaacttctacaatttaacaagaaaatggccatgcttggagacacagta aaactagcatcaaaggatctgaaggttttcaccatctcattcctgctgtatttcttcaccttcacaatgaccggatatct ccttttcagcactacaatgctggactacagtaattttgttggttcttcggaggcaatgtttgctttctctctgggtagtt ttgactttacagctatgaaggacgctcagcctgtacttggtcccatcttctttttcctgttcataggagttatatatatc ggaatgatgagtattttcctgaccattatcgccgatgctttcaccactgtgaaggaagagctagcttccagtcgcaatga atatgaaatagttgactatatgatcagacggcttaagggaataatgggctttgcaaaataa |
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Protein
| Protein ID | pfu_aug2.0_5917.1_26118.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5917.1_26118.t1 LFISFASTMLVFPVNFILMTFFRKCRPKKNTIMQTNQHMPKRGKWKTINGSQIFGRSAKRGLWKRFKDSVSDIINFRQRQ KYANEIDPQEDDTPVPVISGVPVDEKFMKKKKKKKSSLPHWCVYIAWGLSWLSIITAGFFTILYSMQWGKEKANEWLMTF LMSFFQSVIVVQPIKVICIVAFIACILKKPEIDEEDTNEDLNNVIAAHDEEFLNKDSRTIDDIAERRKKANSEFQPPDPE ELETARKQRLLEIEMEMVIREIIVYLFFVLILFFLSYQQRDSDSFIFAENLKATFDNGFSNIQTADQYWKWLETKFLPNL YATNYANGTEIRRWWEKRCISDMESRRIGIPRLRQLRIKPDTCVVNKRLQTLIFHCRDEYGWSDDDTKPYLPGWVKPPPE NLTAMVEDEDPSPWVYQNSLKLRNAPYMATITSYKGGGYAVMFERDYLRNKKMLEGLKNQIWLDEHARGVFLEFTVYNPN INLFGSVIMVTEFMSSGGAVARQEVKVFRLLSYVGGLGILVLIFEVIYALFTLYFFIRCVRKVKKEKCKYFKSFWDILEF VLLVFAVAVIAMYVFKQLLTSVALKALQDIEKADYVNFQSLALYDEMFGWMCAIVVFLATIQFLKLLQFNKKMAMLGDTV KLASKDLKVFTISFLLYFFTFTMTGYLLFSTTMLDYSNFVGSSEAMFAFSLGSFDFTAMKDAQPVLGPIFFFLFIGVIYI GMMSIFLTIIADAFTTVKEELASSRNEYEIVDYMIRRLKGIMGFAK |
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