Gene
| Gene Model ID | pfu_aug2.0_593.1_10962 |
|---|---|
| Locus | scaffold593.1 : 1 ... 14495 : - |
| To GenomeBrowser | scaffold593.1:1..14495 |
| Genes list of scaffold | scaffold593.1 |
| Synonym | pfu_aug1.0_1276.1_36903 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 28-like | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_593.1_10962.t1 | 2 | 1 | UIM | 150 | 163 | 6.8e-06 | 25.2 | 2.3e-06 | 0.011 | 15.2 |
| pfu_aug2.0_593.1_10962.t1 | 2 | 2 | UIM | 178 | 194 | 6.8e-06 | 25.2 | 1.7e-05 | 0.086 | 12.4 |
| pfu_aug2.0_593.1_10962.t1 | 2 | 1 | UCH | 223 | 243 | 1.3e-09 | 37.5 | 4.5e-06 | 0.022 | 13.8 |
| pfu_aug2.0_593.1_10962.t1 | 2 | 2 | UCH | 247 | 344 | 1.3e-09 | 37.5 | 1.2e-08 | 5.9e-05 | 22.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_593.1_10962.t1 | gi|676433557|ref|XP_009046939.1| | hypothetical protein LOTGIDRAFT_138555 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_593.1_10962.t1 | gi|524908718|ref|XP_005109450.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 28-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_593.1_10962.t1 | gi|390333089|ref|XP_003723638.1| | 0.0 | |
| pfu_aug2.0_593.1_10962.t1 | gi|742100110|ref|XP_010868978.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 25 isoform X5 [Esox lucius] | 0.0 |
| pfu_aug2.0_593.1_10962.t1 | gi|742100106|ref|XP_010868975.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 25 isoform X3 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_593.1_10962.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_593.1_10962.t1 atggaagtgatgtcacaatcacggcactacctgtacagcgtcggcaaactccacataaataccagagagcacgagtccct gctgtttaacaaagtgaaggaagtcacaggtgtacatgatgaaagtcttatacgacaggcatgcgaggtgtgtaaagaca accaaggcaaagtgaaagtagaggatgtagtcacagtactgctcagcgatgaatctcttgctggagtgaagaagaagaag tcaaacgttatcccgctccctcctcctgaagcatgtgatagtcgtagtgtgttacttgggaaagggacatcaaccgttga tgctaagcatcagcaaggctcagaaaacagaaatagccatggtccaaaacaggagttgggcaccgtgccgtttggaccac ccacaaagagtcaagcgggagtgatagatctaacaagtgacgcaggggaggatgatatacagaaggctatagcagcctca ctacaggagacacaggggagtggagcaggaatcctggggggtcaggtgtccagggaggaacaagatatcagcagagtttt ggagcaaagtttagctgaaagtaaagctggcacaaaacgtaagcgaggtgatttatggttcgtggatcctctgaaccccc atgaaagaaagcgacaggagggatgtccagtgggcctgaaaaacgtaggcaacacttgctggttcagtgctgttatacag gagacaagaaatttacgattcatgcaggagttgcgatacctgtttgcgctgatggtcgggtcaagtaagaagtatgtgga cccgtctaaggctgtggatatacttaaagaagctttctcacagtcagcggtgggggtgggcgacgcccagcaggatgtga gtgaatttcagcataagctgttagaatggttagaagatgcctttaagtgtcacccctcaacttcaggacatgggtcaggg ggagataactctgaggcaggtgaatgcagtcggagaaatccgatggtggagttgttttacggacagtacagagcagaggg ggtaaatgagg |
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Protein
| Protein ID | pfu_aug2.0_593.1_10962.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_593.1_10962.t1 MEVMSQSRHYLYSVGKLHINTREHESLLFNKVKEVTGVHDESLIRQACEVCKDNQGKVKVEDVVTVLLSDESLAGVKKKK SNVIPLPPPEACDSRSVLLGKGTSTVDAKHQQGSENRNSHGPKQELGTVPFGPPTKSQAGVIDLTSDAGEDDIQKAIAAS LQETQGSGAGILGGQVSREEQDISRVLEQSLAESKAGTKRKRGDLWFVDPLNPHERKRQEGCPVGLKNVGNTCWFSAVIQ ETRNLRFMQELRYLFALMVGSSKKYVDPSKAVDILKEAFSQSAVGVGDAQQDVSEFQHKLLEWLEDAFKCHPSTSGHGSG GDNSEAGECSRRNPMVELFYGQYRAEGVNE |
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