Gene
| Gene Model ID | pfu_aug2.0_593.1_10963 |
|---|---|
| Locus | scaffold593.1 : 15196 ... 39098 : + |
| To GenomeBrowser | scaffold593.1:15196..39098 |
| Genes list of scaffold | scaffold593.1 |
| Synonym | pfu_aug1.0_1276.1_36905 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_593.1_10963.t1 | 2 | 1 | ABA_GPCR | 25 | 87 | 0.0 | 202.5 | 0.061 | 230.0 | 0.7 |
| pfu_aug2.0_593.1_10963.t1 | 1 | 1 | DUF3735 | 141 | 210 | 3.6e-25 | 87.7 | 2.6e-28 | 9.6e-25 | 86.4 |
| pfu_aug2.0_593.1_10963.t1 | 2 | 2 | ABA_GPCR | 276 | 450 | 0.0 | 202.5 | 0.0 | 0.0 | 202.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_593.1_10963.t1 | gi|471391803|ref|XP_004380382.1| | PREDICTED: Golgi pH regulator isoform X1 [Trichechus manatus latirostris] | 0.0 |
| pfu_aug2.0_593.1_10963.t1 | gi|676443865|ref|XP_009050242.1| | hypothetical protein LOTGIDRAFT_201453 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_593.1_10963.t1 | gi|524880218|ref|XP_005096776.1| | PREDICTED: Golgi pH regulator-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_593.1_10963.t1 | gi|507713699|ref|XP_004647889.1| | PREDICTED: Golgi pH regulator [Octodon degus] | 0.0 |
| pfu_aug2.0_593.1_10963.t1 | gi|533201916|ref|XP_005413506.1| | PREDICTED: Golgi pH regulator-like isoform X2 [Chinchilla lanigera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_593.1_10963.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_593.1_10963.t1 atgtcttttcttgtagactcgtgtcttatcgtattctcacagatatttttctttgctggaggttatgtttttttcatcaa gcagctattcagagattatgaggtacatcacacggtcgttctactggtattttccgtgacgttttctctatcctgtacta tgtttgaactcatcatatttgagatactgggcgtcatggaatccagttctcgttatttccattggaagcttggcctgtat tccatcctgtttgttcttattgccgtactaccattctatattggttacttcatcattggaaatatcagactggtaccaca aaaaagacattggcgagccggcttgacagcggctgtatggtttgtattcttgtaccttttctggaaggttggagatccat ttccgatactcagtcctaaacatggtatattttccattgagcagtgtatagggaggataggggttctgggagtgaccttg atggccgttttgtcgggtttcggagctgttaattatccttacacctccatgttctactttatcagagctgtttctgatgc agatatacagggagtagaaaaacgtctgatgcagaccatggatatgatcataatgaagaagaaaagggttgcccttgcca agagggagagtttaaaacaagccagtatcaaccaatcacagggaggaatatgggggatcttcaaaaacgtacgactggcc gcaccaagtacagaaaatattccgttactcaaacaggaaactgatgcatatgaagagttgagcaggcagctatttttaga atctgttgatttgcacaatgcccaggagagaatagcttactcaaaaacctttaaagggaaatattttaattttctgggat atttcttctccatatactgtgtatggaaaatattcatatcaacagtgaacataatatttgaccgtgtgggaaaagtggac cctgtcacaagaggaatagaaatagccgttaattacctcgggattcagtttgacgttttattctggtctcagcagatctc gttttacttaataggaatcatcattataacctctgttaggggtctgttgttaacactagccaagtttttctatgcaatag caagctctaagtcatcaaatgccattgtcctgtgtttagctcagataatgggcatgtattttgtatcatcagttctttta atgaggatgaatatgccacaagaatatagaatgattatcacagaggtgctaggagaactacagtttaacttttaccatag atggtttgatgtgatattcctgattagtgctttatctagtataggatttctatatatagcgcataaacatccgcaggaga aaagtgttacaggatactga |
|
Protein
| Protein ID | pfu_aug2.0_593.1_10963.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_593.1_10963.t1 MSFLVDSCLIVFSQIFFFAGGYVFFIKQLFRDYEVHHTVVLLVFSVTFSLSCTMFELIIFEILGVMESSSRYFHWKLGLY SILFVLIAVLPFYIGYFIIGNIRLVPQKRHWRAGLTAAVWFVFLYLFWKVGDPFPILSPKHGIFSIEQCIGRIGVLGVTL MAVLSGFGAVNYPYTSMFYFIRAVSDADIQGVEKRLMQTMDMIIMKKKRVALAKRESLKQASINQSQGGIWGIFKNVRLA APSTENIPLLKQETDAYEELSRQLFLESVDLHNAQERIAYSKTFKGKYFNFLGYFFSIYCVWKIFISTVNIIFDRVGKVD PVTRGIEIAVNYLGIQFDVLFWSQQISFYLIGIIIITSVRGLLLTLAKFFYAIASSKSSNAIVLCLAQIMGMYFVSSVLL MRMNMPQEYRMIITEVLGELQFNFYHRWFDVIFLISALSSIGFLYIAHKHPQEKSVTGY |
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