Gene
| Gene Model ID | pfu_aug2.0_593.1_10965 |
|---|---|
| Locus | scaffold593.1 : 50206 ... 56597 : + |
| To GenomeBrowser | scaffold593.1:50206..56597 |
| Genes list of scaffold | scaffold593.1 |
| Synonym | pfu_aug1.0_1276.1_36907 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_593.1_10965.t1 | 1 | 1 | zf-LITAF-like | 148 | 219 | 4.6e-25 | 87.2 | 6.3e-28 | 6.7e-25 | 86.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_593.1_10965.t1 | gi|675860930|ref|XP_009016025.1| | hypothetical protein HELRODRAFT_64460 [Helobdella robusta] | 4.0e-19 |
| pfu_aug2.0_593.1_10965.t1 | gi|524881409|ref|XP_005097356.1| | PREDICTED: cell death-inducing p53-target protein 1 homolog [Aplysia californica] | 4.0e-19 |
| pfu_aug2.0_593.1_10965.t1 | gi|221131074|ref|XP_002158359.1| | PREDICTED: lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [Hydra vulgaris] | 8.0e-19 |
| pfu_aug2.0_593.1_10965.t1 | gi|512867796|ref|XP_004918000.1| | PREDICTED: lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog isoform X2 [Xenopus (Silurana) tropicalis] | 6.0e-18 |
| pfu_aug2.0_593.1_10965.t1 | gi|156361335|ref|XP_001625473.1| | predicted protein [Nematostella vectensis] | 6.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_593.1_10965.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_593.1_10965.t1 atgtcgattgccccaccgagttacgaagaatgcgtcaagggttacgccctttcttacacgcctggtaggaccactggtaa gggacccccgcaaggagcgcaggagaatattttatcttctcaataccaacatcaaccaccacttccagtcggttgcgcga tgggcttggattcttacagttaccctgttcatttggatgaaaagtcaggagcaaatcccgaaattagcatcgagattccc gatggcccgccttcgtcttaccctggaaccacgcctgaataccaagtacagatatctggatacgctggtacagcaatact gaatgaggaaatactgcccggatatgctcctgatcaaaggtcgaacgaaatcatcaatatgcatgacgaacccacaaatg tgattttaaccacacagccagaagtgacagcggcgacgttcaaagagtctcctgtccgaatacagtgtcctcattgtaac aaagaaatcctgacggaaacggaagatgtgattggaagtgagtcatggttctggtgcttctttcttatgttctttgggtg tttcctgggatgctgcctgattccatttttcatgaagtcctgtttggatgtggaacacacgtgcccagagtgcggggaga ctgtgggaacatattcactatcaacgccacaattcaccggaagttcacgaggcaggtccggaagtaggggtttctctagc cgtttccgaagtcgcctgcgtcatcgtaatagacatcatcaatcgcacctgcaaaacatgcgacaacgtcaacgcaagcg tcgtcaaaaacgtcagcgtcaacggcgtcgccgtcgtcgtcgtcgttga |
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Protein
| Protein ID | pfu_aug2.0_593.1_10965.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_593.1_10965.t1 MSIAPPSYEECVKGYALSYTPGRTTGKGPPQGAQENILSSQYQHQPPLPVGCAMGLDSYSYPVHLDEKSGANPEISIEIP DGPPSSYPGTTPEYQVQISGYAGTAILNEEILPGYAPDQRSNEIINMHDEPTNVILTTQPEVTAATFKESPVRIQCPHCN KEILTETEDVIGSESWFWCFFLMFFGCFLGCCLIPFFMKSCLDVEHTCPECGETVGTYSLSTPQFTGSSRGRSGSRGFSS RFRSRLRHRNRHHQSHLQNMRQRQRKRRQKRQRQRRRRRRRR |
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