Gene
| Gene Model ID | pfu_aug2.0_593.1_10971 |
|---|---|
| Locus | scaffold593.1 : 152089 ... 158055 : - |
| To GenomeBrowser | scaffold593.1:152089..158055 |
| Genes list of scaffold | scaffold593.1 |
| Synonym | pfu_aug1.0_16490.1_46982 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| galactokinase 1 | GO:0004335 GO:0005524 GO:0005737 GO:0006012 GO:0046835 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_593.1_10971.t1 | 2 | 1 | GalKase_gal_bdg | 21 | 70 | 1.1e-21 | 75.8 | 1.0e-24 | 5.1e-21 | 73.6 |
| pfu_aug2.0_593.1_10971.t1 | 3 | 1 | GHMP_kinases_N | 116 | 127 | 7.7e-11 | 41.8 | 0.29 | 1400.0 | -0.6 |
| pfu_aug2.0_593.1_10971.t1 | 3 | 2 | GHMP_kinases_N | 126 | 193 | 7.7e-11 | 41.8 | 8.9e-14 | 4.4e-10 | 39.4 |
| pfu_aug2.0_593.1_10971.t1 | 1 | 1 | GHMP_kinases_C | 295 | 373 | 1.6e-13 | 50.6 | 6.2e-17 | 3.1e-13 | 49.7 |
| pfu_aug2.0_593.1_10971.t1 | 3 | 3 | GHMP_kinases_N | 314 | 341 | 7.7e-11 | 41.8 | 0.46 | 2300.0 | -1.3 |
| pfu_aug2.0_593.1_10971.t1 | 2 | 2 | GalKase_gal_bdg | 369 | 383 | 1.1e-21 | 75.8 | 0.21 | 1000.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_593.1_10971.t1 | gi|676472359|ref|XP_009059467.1| | hypothetical protein LOTGIDRAFT_192573 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_593.1_10971.t1 | gi|260831607|ref|XP_002610750.1| | hypothetical protein BRAFLDRAFT_90953 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_593.1_10971.t1 | gi|115928235|ref|XP_798116.2| | PREDICTED: galactokinase [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_593.1_10971.t1 | gi|524909938|ref|XP_005109861.1| | PREDICTED: galactokinase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_593.1_10971.t1 | gi|54400506|ref|NP_001006002.1| | galactokinase [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_593.1_10971.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_593.1_10971.t1 atggcagtaaacggagctacggcaatacccccagtgtcagaattagtgactaccgcgtgtaaagccttcaaggacaagta tgggagggaccccaccacggccgcctgtgggccggggagggtcaacctgatcggggaacacacagattacaacgagggat tcgtattccccatggctttgcctcaggtgacggtcatggttgggagtaagggggatggagatttatgccgtgtactgacc accgcggagggtgtggacgaacctaagtacgtggagttctcaatcaaagacaataagccagggacccctaaatgggctaa ctacgtcaagggcgttgttgcaaattatgttgggacgccaagtggatttgatgcagtggtggtgtcttcagttccactcg gaggtggcgtgtccagttctgcctccatcgaagtggcgacatacacttttcttgacgccctgaatggaggagcggacaat gttttaaagaaagacaaagctctagcatgtcagaaagcagagcatgagtacgcaggcatgccatgtggaattatggacca attcatatctatgatgggcgaagatggacatgccttgttaatcgactgcaggtcagtagagagcaccctggtccccatga aagacccaaacgtcgttgtcctggtaaccaactctaacgtcaaacacgaactgaccggttcggagtaccccaccagacgg aaacaatgcgagaccgcagcgtccctacttggtaaacgtagcctgagagaggccaccgacaaagacctagaagactccaa ggacaaacttgacaacgttacataccgccgagctcgtcacgtgattggagagatcaaaaggacagaggaagcagccaact gccttcagaacggagattatgtaaagtttgggaagctgatggtggcaagtcatgatgctcttagggacgactatgaggtg tcatgcccagaactggacagacttgtggaggcagccatggaagtggagggtgtgtacggatccaggatgactgggggtgg attcgggggttgtacagtcactctggtgaaaaaagactctgtagagaaagctatacaacatatacagagtcgctatgaca agaaggcctccttctatgtgtgtgccccatcagccggtgctaaaatactatctgtatga |
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Protein
| Protein ID | pfu_aug2.0_593.1_10971.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_593.1_10971.t1 MAVNGATAIPPVSELVTTACKAFKDKYGRDPTTAACGPGRVNLIGEHTDYNEGFVFPMALPQVTVMVGSKGDGDLCRVLT TAEGVDEPKYVEFSIKDNKPGTPKWANYVKGVVANYVGTPSGFDAVVVSSVPLGGGVSSSASIEVATYTFLDALNGGADN VLKKDKALACQKAEHEYAGMPCGIMDQFISMMGEDGHALLIDCRSVESTLVPMKDPNVVVLVTNSNVKHELTGSEYPTRR KQCETAASLLGKRSLREATDKDLEDSKDKLDNVTYRRARHVIGEIKRTEEAANCLQNGDYVKFGKLMVASHDALRDDYEV SCPELDRLVEAAMEVEGVYGSRMTGGGFGGCTVTLVKKDSVEKAIQHIQSRYDKKASFYVCAPSAGAKILSV |
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