Gene
| Gene Model ID | pfu_aug2.0_593.1_10973 |
|---|---|
| Locus | scaffold593.1 : 182906 ... 189872 : + |
| To GenomeBrowser | scaffold593.1:182906..189872 |
| Genes list of scaffold | scaffold593.1 |
| Synonym | pfu_aug1.0_152247.1_35592 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fanconi anemia group j protein | GO:0000077 GO:0003677 GO:0004003 GO:0005515 GO:0005524 GO:0005743 GO:0005762 GO:0006302 GO:0006357 GO:0008285 GO:0031965 GO:0032508 GO:0042254 GO:0044281 GO:0046872 GO:0051539 GO:0070124 GO:0070125 GO:0070126 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_593.1_10973.t1 | 1 | 1 | Helicase_C_2 | 17 | 137 | 2.00386e-43 | 148.2 | 0.0 | 5.89947e-43 | 146.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_593.1_10973.t1 | gi|585694260|ref|XP_006821788.1| | PREDICTED: uncharacterized protein LOC102809144, partial [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_593.1_10973.t1 | gi|700434978|ref|XP_009956466.1| | PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein homolog, partial [Leptosomus discolor] | 0.0 |
| pfu_aug2.0_593.1_10973.t1 | gi|587011007|ref|XP_006940196.1| | PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein [Felis catus] | 0.0 |
| pfu_aug2.0_593.1_10973.t1 | gi|699628723|ref|XP_009901307.1| | PREDICTED: Fanconi anemia group J protein [Picoides pubescens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_593.1_10973.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_593.1_10973.t1 atgagacagttctatgacactattaacaacacgtctgtagacgatgaagatgaacattacgaggatagagacggagctct gtttatagcagtttgtagagggaaagttagcgagggtttggattttactgatgacaatgctagagctgttattactgtgg gtattccatttccaaatttcaaagatgttcaggtgaaactgaagagagagtacaatgatgctcacagagcttccagaggt ttgttatcaggatcagagtggtatgaaatccaggctttcagggctctgaatcaggcactcggcagatgtatacgtcatag aaaagattggggagcacttatcctggtagatgagagatttgtcaaaaacagtgccaaatactgtaaaggattatctaagt gggtgagaaacaaagtgcttcccttccatgactgtcaggatgcaatgacgtccatagaaaagttcacaaacagtagaatg aaggacatgcctgttgtaaaccctgatacctcatttataccaagtacaccaagtggtgcagatcagaaggtgaaaggatt aatggacacaccccttacatctacaccttatagcaagggggagaccagtccatggaacagcttacccacccatcctttct tcactccctttaagccaaataaacctgaaaagacaccagccacttcaatatccaggaaaacattccaagctgatgataaa accgagaaacgagcatcctatagcttactgtctcctacacatgtgaaccaaaatcctggctatcagaacgctgtggcgca gagtaaggttgtgagacctacgataggaagccaaaataaattaacgatcgctgtcaaccagcctcaacctacaaccattt cccagaaacagactcaagttgtagtccagaatactatgatgaagcaagtcgtggacataatcaacacccctgctagcaat gataaaaacccacagaatgttgctgagggtagaaatggtcttgtaaatcaccatcagcaacaatcaggacttacaagtcc acaacagcagtcgatgcttagtcctactcattctcaatctctacttttaaacacttcaagcagccccatggatatcagtt cggaatcttcaaacattgctagttcctcagtgttacagcaatcctcgtcagtgaacagtgctacaaaggagtgtcttggt gatagtaagttttataagtttcatcagaaaaatacggagtgctctactcccaaggtgagacaggagccgtctgcttcgga gcatgtagttgagaggtctcaaacacctgttctgtttaataacactgaggaggacggagtgcagatcaaagacaattcag acaaaatatgtgaaaaggaagcattagacagaaagtcaaaaatctgtgtagatacaaataaaatagaaatgaggaaacct cttttcaaactgaaaaagacgccaggcagtgcgtcaaaagttttggataattcccaagaggatgatagtgaaaaagattt taaaacttcaaaatcatctagaatcaagtcggctctatcaaggtttgcgagaaaggaaacaaaagaagctgaggaatctt tcactgataacaatgttgcaaacacttcagacattgtgaatgaaaaaagagcctcaaaatgtgaagtgaaagaggaacca gaagttggaataccagatcctccacaaatgttggacattaatgacagtattattaaacaggaggaggagggagatgataa tgatgaagtggaaacattgaggacacgtaggggggcaaggggggtaaagagacgtcaacaagccaacaccagacagaagt caaagagggcatgtggtgtagacttcctggatggcattgacgacactaaggaaaacaaggtgacagagtcttcctcttta aaatgtgcagcttgtgggaaaatattggtccactctctatcaggtgtaaggttagacagtacctgggaggcagacacagc atgctgtatacagtacgtacagtgtcaacactgtgtaacaagcaatgataaggcagctatagtgggggctaaaatagtgg caacaggagcaaatccaggagaattcaaggaggggcaggcatggttgttttcagcatgtgtgatggtgtga |
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Protein
| Protein ID | pfu_aug2.0_593.1_10973.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_593.1_10973.t1 MRQFYDTINNTSVDDEDEHYEDRDGALFIAVCRGKVSEGLDFTDDNARAVITVGIPFPNFKDVQVKLKREYNDAHRASRG LLSGSEWYEIQAFRALNQALGRCIRHRKDWGALILVDERFVKNSAKYCKGLSKWVRNKVLPFHDCQDAMTSIEKFTNSRM KDMPVVNPDTSFIPSTPSGADQKVKGLMDTPLTSTPYSKGETSPWNSLPTHPFFTPFKPNKPEKTPATSISRKTFQADDK TEKRASYSLLSPTHVNQNPGYQNAVAQSKVVRPTIGSQNKLTIAVNQPQPTTISQKQTQVVVQNTMMKQVVDIINTPASN DKNPQNVAEGRNGLVNHHQQQSGLTSPQQQSMLSPTHSQSLLLNTSSSPMDISSESSNIASSSVLQQSSSVNSATKECLG DSKFYKFHQKNTECSTPKVRQEPSASEHVVERSQTPVLFNNTEEDGVQIKDNSDKICEKEALDRKSKICVDTNKIEMRKP LFKLKKTPGSASKVLDNSQEDDSEKDFKTSKSSRIKSALSRFARKETKEAEESFTDNNVANTSDIVNEKRASKCEVKEEP EVGIPDPPQMLDINDSIIKQEEEGDDNDEVETLRTRRGARGVKRRQQANTRQKSKRACGVDFLDGIDDTKENKVTESSSL KCAACGKILVHSLSGVRLDSTWEADTACCIQYVQCQHCVTSNDKAAIVGAKIVATGANPGEFKEGQAWLFSACVMV |
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