Gene
| Gene Model ID | pfu_aug2.0_594.1_14347 |
|---|---|
| Locus | scaffold594.1 : 21196 ... 27035 : - |
| To GenomeBrowser | scaffold594.1:21196..27035 |
| Genes list of scaffold | scaffold594.1 |
| Synonym | pfu_aug1.0_11285.1_24866 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_594.1_14347.t1 | 2 | 1 | NUDIX | 59 | 193 | 4.7e-34 | 116.9 | 3.9e-29 | 9.7e-26 | 90.0 |
| pfu_aug2.0_594.1_14347.t1 | 2 | 2 | NUDIX | 194 | 263 | 4.7e-34 | 116.9 | 2.3e-09 | 5.7e-06 | 26.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_594.1_14347.t1 | gi|470298750|ref|XP_004346256.1| | isopentenyl pyrophosphate isomerase [Capsaspora owczarzaki ATCC 30864] | 0.0 |
| pfu_aug2.0_594.1_14347.t1 | gi|699701583|ref|XP_009907371.1| | PREDICTED: isopentenyl-diphosphate Delta-isomerase 1 [Picoides pubescens] | 0.0 |
| pfu_aug2.0_594.1_14347.t1 | gi|699598305|ref|XP_009869025.1| | PREDICTED: isopentenyl-diphosphate Delta-isomerase 1 [Apaloderma vittatum] | 0.0 |
| pfu_aug2.0_594.1_14347.t1 | gi|514728638|ref|XP_005015688.1| | PREDICTED: isopentenyl-diphosphate Delta-isomerase 1, partial [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_594.1_14347.t1 | gi|719750875|ref|XP_010212914.1| | PREDICTED: isopentenyl-diphosphate Delta-isomerase 1 [Tinamus guttatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_594.1_14347.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_594.1_14347.t1 atggccaccagaacagcttcctcagaatcagatgaattcctgtcagggctagatcccatacagaaaaggttattggagga aaactgcatccttattgacgaaaatgataggagagttggccatgcaacaaagaaggattgtcatctcaactctaacattg aaacaggactgttgcacagagctttcagtgttttcctgtttaatatagatggtaaactactccttcagcaaagatctacg gctaaaattacatttccaggttatttcaccaatacatgctgtagtcacccattaaatacagaattggaattagaggaagc cggtgcattaggtgttaaaagagctgctcaaagaaaactggagcacgagctcggcatatcaccaaatcaggtatcattag aggacattcactacttaactcgggtgtggtacaaggcgagatctgatggtacctggggagagcatgaaatagactactgc ctcatagctcagaaagacgtaaatgttgacgcaaacaaaaacgaggtgatggattggagatatgtggacagagaggagct taagaacttgatcaaggacattcactacttaactcgggtgtggtacaaggcgagatctgatggtacctggggagagcatg aaatagactactgcctcatagctcagaaagacgtaaatgttgatgcaaacaaaaatgaggtgatggattggagatatgtg gacagagaggagcttaagaacttgatcaaatcttcggaaaatggctcagtgaaaataactccatggttcaagttgatctc acagagtttactatggaaatggtgggacaacatagctgatctgaaagtagttactgacagaaacaccatacatagactac aatga |
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Protein
| Protein ID | pfu_aug2.0_594.1_14347.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_594.1_14347.t1 MATRTASSESDEFLSGLDPIQKRLLEENCILIDENDRRVGHATKKDCHLNSNIETGLLHRAFSVFLFNIDGKLLLQQRST AKITFPGYFTNTCCSHPLNTELELEEAGALGVKRAAQRKLEHELGISPNQVSLEDIHYLTRVWYKARSDGTWGEHEIDYC LIAQKDVNVDANKNEVMDWRYVDREELKNLIKDIHYLTRVWYKARSDGTWGEHEIDYCLIAQKDVNVDANKNEVMDWRYV DREELKNLIKSSENGSVKITPWFKLISQSLLWKWWDNIADLKVVTDRNTIHRLQ |
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