Gene
| Gene Model ID | pfu_aug2.0_594.1_14358 |
|---|---|
| Locus | scaffold594.1 : 192070 ... 201374 : + |
| To GenomeBrowser | scaffold594.1:192070..201374 |
| Genes list of scaffold | scaffold594.1 |
| Synonym | pfu_aug1.0_19693.1_40173 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_594.1_14358.t1 | 2 | 1 | DOMON | 70 | 91 | 3.4e-13 | 49.6 | 0.032 | 480.0 | 0.6 |
| pfu_aug2.0_594.1_14358.t1 | 2 | 2 | DOMON | 154 | 275 | 3.4e-13 | 49.6 | 1.2e-16 | 1.7e-12 | 47.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_594.1_14358.t1 | gi|676446685|ref|XP_009051161.1| | hypothetical protein LOTGIDRAFT_174310 [Lottia gigantea] | 2.0e-24 |
| pfu_aug2.0_594.1_14358.t1 | gi|260813244|ref|XP_002601328.1| | hypothetical protein BRAFLDRAFT_123245 [Branchiostoma floridae] | 4.0e-11 |
| pfu_aug2.0_594.1_14358.t1 | gi|260814821|ref|XP_002602112.1| | hypothetical protein BRAFLDRAFT_140619 [Branchiostoma floridae] | 1.0e-10 |
| pfu_aug2.0_594.1_14358.t1 | gi|524873509|ref|XP_005093500.1| | PREDICTED: uncharacterized protein LOC101860392 [Aplysia californica] | 3.0e-10 |
| pfu_aug2.0_594.1_14358.t1 | gi|260813246|ref|XP_002601329.1| | hypothetical protein BRAFLDRAFT_82772 [Branchiostoma floridae] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_594.1_14358.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_594.1_14358.t1 atggaagacatgttgatggtgtcttcacacggtgtaacttactttgatttattaacatcgaaagaattttccgggaaatt atcagaattctgtcatttatggaagaagtataataacaatagagctgctgaatccagaaaaatcacacttattgtcatta aattgacctggcaaacaatagagagcttcgctatggaaacacaaaagaaagataccgatatttccgtgtgttttccacaa gatgccacaaacatcagtggtactttcaatggtaaaatacagacgttacaatcaaacgacacagatgtagttacgtgctc ttgtcagacagaaatcgactccttccagtgtgtgccttccacagacatcagacgacactacatacattttacggtagcat cgagtaatagagcagagatactgggactatacggtgattcggcagactgtggtcacatgacatgtaaatttttcgttagc atcgcttcagacgtcacgaacgagaattttgacgtagagttgagtggaataacggatggatggatcggtattggattctc ttccgataaaataatgggtggagaagacgacattatatcgtgtcaaaaattccacaaagatcgtgttgaaatcatgtcat atgtctcaaggactagacattcgcgaccggaaagactcgaaccccattatttgaacctcacttcctctaaatcgtctgat gcctacatatactgccgatttgttctaccgtttagcagacctcacgtgaatggcagacgatacctggatccaaccaatga ttggtaccagatgtatgcacgtggtccccttaccatgggtttgtatggaatttaa |
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Protein
| Protein ID | pfu_aug2.0_594.1_14358.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_594.1_14358.t1 MEDMLMVSSHGVTYFDLLTSKEFSGKLSEFCHLWKKYNNNRAAESRKITLIVIKLTWQTIESFAMETQKKDTDISVCFPQ DATNISGTFNGKIQTLQSNDTDVVTCSCQTEIDSFQCVPSTDIRRHYIHFTVASSNRAEILGLYGDSADCGHMTCKFFVS IASDVTNENFDVELSGITDGWIGIGFSSDKIMGGEDDIISCQKFHKDRVEIMSYVSRTRHSRPERLEPHYLNLTSSKSSD AYIYCRFVLPFSRPHVNGRRYLDPTNDWYQMYARGPLTMGLYGI |
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