Gene
| Gene Model ID | pfu_aug2.0_594.1_14362 |
|---|---|
| Locus | scaffold594.1 : 245826 ... 266239 : - |
| To GenomeBrowser | scaffold594.1:245826..266239 |
| Genes list of scaffold | scaffold594.1 |
| Synonym | pfu_aug1.0_50463.1_63379 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_594.1_14362.t1 | 2 | 1 | Septin | 8 | 62 | 8.5e-08 | 31.5 | 1.1 | 590.0 | -0.8 |
| pfu_aug2.0_594.1_14362.t1 | 1 | 1 | PDZ | 117 | 187 | 2.6e-10 | 40.3 | 9.7e-13 | 5.1e-10 | 39.3 |
| pfu_aug2.0_594.1_14362.t1 | 2 | 1 | PDZ_2 | 132 | 188 | 5.8e-06 | 26.1 | 6.0e-08 | 3.2e-05 | 23.7 |
| pfu_aug2.0_594.1_14362.t1 | 1 | 1 | fn3 | 215 | 291 | 1.5e-10 | 41.0 | 6.8e-13 | 3.6e-10 | 39.8 |
| pfu_aug2.0_594.1_14362.t1 | 2 | 2 | Septin | 378 | 464 | 8.5e-08 | 31.5 | 4.4e-10 | 2.3e-07 | 30.1 |
| pfu_aug2.0_594.1_14362.t1 | 1 | 1 | AIG1 | 379 | 541 | 1.4e-09 | 37.4 | 5.7e-12 | 3.0e-09 | 36.2 |
| pfu_aug2.0_594.1_14362.t1 | 1 | 1 | MMR_HSR1 | 380 | 503 | 5.0e-07 | 29.6 | 5.0e-09 | 2.7e-06 | 27.3 |
| pfu_aug2.0_594.1_14362.t1 | 2 | 2 | PDZ_2 | 792 | 810 | 5.8e-06 | 26.1 | 4.6 | 2400.0 | -1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_594.1_14362.t1 | gi|697472102|ref|XP_009669300.1| | PREDICTED: uncharacterized protein LOC104141623 [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_594.1_14362.t1 | gi|688552140|ref|XP_009299275.1| | PREDICTED: uncharacterized protein wu:fl09a04 isoform X2 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_594.1_14362.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_594.1_14362.t1 atgtacacaaggcaatgccaaaaagaagatttgtggaatcatatagtcaggtatcaatgcgacgctaactttcaagtgaa cagcagttttacggaggaggacttctcagatctccacatgtcagactctgatgtttatatttatgtgtatacaatagtac ctaccgccatttttatcacagtactggttgtcgttgctttctgttgctatagacgccaaaagcagaaaaataaaccggac acagataaagatgtgaaatccagttcagataccaaggaaacagaattccttgattctacagaattgtcagaccgaagggg tgtagacaaggacatttacttaaaattgtcagacaatcagaagtttggtttctctattgtcggtggcgggagttttgagg gagtgtatgttcacgatattttcagtgattcaccaaattctgaatcaaagctcagaaaaggagatcagattgtacagata ggtgacaaagatacatcacgctgggaaaaacaggaggtaatcagaggtctgaaggaaagtgggaaaagagtttatataac aacacgaaataaattcaaagaatacagaaagttcttaccaagaattggcaatactgtcaaggaaatgcagacctcagatg gaaaacccagtaaaccagtgaagaaagcagtaaatacaggcacaatcacaatcgaatgggaaaaacctgtggggatgagg aaggatgatattgcatgttatgagattcaatacaaaccgtatggggggcatgcctctacagtcaaaacaataaggactcc agacaattcagaaacatatgaagttagagacctaaaaacaaacactgagtatgtattccgggtaggcattataagaacgg atgaagatgaggatgacgatgacagaccgcctcttcgcagtccatacagcaatacaattgcaacagaaatgacgttagct aatcttatagttgatgataactcatattttcctcgcaaagaagagaaaacagacaaaggaatcacctgctggaaactgcc tgtgaacattgttgaagagtcagttgatccagaggccatgacaagaagatgtattttggatacaaatcgtcacgatgtca gcaagctctcaaaaaccatcatgatcgtaggagctacgggtacaggaaagagcacactgatagacggtatgatcaactat atatttgacgtcaggtgggaagacaatttccgattcaaactgatagatctgacagaaatagaaaaagagaaatttttgga acaggacaagtcgcagactgaatggataacttgctataccatcaaaagaatgaaaaggagcaagatcgactatgacttga atatcatagatacacctggctttggagatacccgaggaccagagcgtgacgatcaaataagagttcagatagaaaggttc ttcaaagagaccaacagagctgggattcaaactattgatgctgtctgctttgttgttacaccgcagcctcgactgaacgc accacagaagtacatttttgatcgtgtgttgagcatgtttggaaaggacattgaacgcaatattttcatgttggttacgt atgccgatgccgctgaaccacctgtgctggctgctctgaaggaggataacattcaatatgaagattattttaagttcaat aattcagccctttttgtgtcgaatgaaaagccgggggacgatgacatacacaacaaaagaacagaatggcaaggtcacaa actgaactggaaaatgggaatgaacagctttcagacttttttcgaagcaattcagaccttcacaccgcgaagtctagtaa tgacttcggaggtactcgatgctcaaatcaaacttaaatctgttgtccagggtctacaccattatattgtacgtcttgtt aatgatatgcaaactttgaaagatacatgtaaatccatagacatacacagggatgatattgagaaaaataaagacttcga atatactgtacaggaaactgagagaaaagaagagccgattccatctaaattcatgcatatggcaacaaattgtctaaatt tgtgtggtcaccataggtcggaacatgagagatcaagtgaaaagaaattcgtgggtagaacagtgacaaaaacaaggaca tacgaggaaatgaaagaccggttcaacatagcatctgataaggcacagaatgcgaacgcagtcaaagcaaatgtagaaaa tgaattgaagaaacttggtagagatgctctgctgaaggtaaagcagataaaggacttaatcaacgagctacaagacaaag ccctgagaccaacacctttgactaacaaagactaccttaatctgcttatagacaatgaaaagagtaatggaaaaccggga tggagtaatcgtataacggcttataggaaaatgataaaagagtcggaattgctggagcttgcaatggaaacggaacactc gcctttcgataacatcgatgattttctgaatgatatgagagaagagaccgatccagatgttccaatggaagtttaa |
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Protein
| Protein ID | pfu_aug2.0_594.1_14362.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_594.1_14362.t1 MYTRQCQKEDLWNHIVRYQCDANFQVNSSFTEEDFSDLHMSDSDVYIYVYTIVPTAIFITVLVVVAFCCYRRQKQKNKPD TDKDVKSSSDTKETEFLDSTELSDRRGVDKDIYLKLSDNQKFGFSIVGGGSFEGVYVHDIFSDSPNSESKLRKGDQIVQI GDKDTSRWEKQEVIRGLKESGKRVYITTRNKFKEYRKFLPRIGNTVKEMQTSDGKPSKPVKKAVNTGTITIEWEKPVGMR KDDIACYEIQYKPYGGHASTVKTIRTPDNSETYEVRDLKTNTEYVFRVGIIRTDEDEDDDDRPPLRSPYSNTIATEMTLA NLIVDDNSYFPRKEEKTDKGITCWKLPVNIVEESVDPEAMTRRCILDTNRHDVSKLSKTIMIVGATGTGKSTLIDGMINY IFDVRWEDNFRFKLIDLTEIEKEKFLEQDKSQTEWITCYTIKRMKRSKIDYDLNIIDTPGFGDTRGPERDDQIRVQIERF FKETNRAGIQTIDAVCFVVTPQPRLNAPQKYIFDRVLSMFGKDIERNIFMLVTYADAAEPPVLAALKEDNIQYEDYFKFN NSALFVSNEKPGDDDIHNKRTEWQGHKLNWKMGMNSFQTFFEAIQTFTPRSLVMTSEVLDAQIKLKSVVQGLHHYIVRLV NDMQTLKDTCKSIDIHRDDIEKNKDFEYTVQETERKEEPIPSKFMHMATNCLNLCGHHRSEHERSSEKKFVGRTVTKTRT YEEMKDRFNIASDKAQNANAVKANVENELKKLGRDALLKVKQIKDLINELQDKALRPTPLTNKDYLNLLIDNEKSNGKPG WSNRITAYRKMIKESELLELAMETEHSPFDNIDDFLNDMREETDPDVPMEV |
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