Gene
| Gene Model ID | pfu_aug2.0_594.1_14363 |
|---|---|
| Locus | scaffold594.1 : 268360 ... 274360 : + |
| To GenomeBrowser | scaffold594.1:268360..274360 |
| Genes list of scaffold | scaffold594.1 |
| Synonym | pfu_aug1.0_10373.1_53533 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_594.1_14363.t1 | 1 | 1 | fn3 | 181 | 255 | 4.9e-08 | 32.9 | 7.1e-12 | 1.1e-07 | 31.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_594.1_14363.t1 | gi|558140607|ref|XP_006118413.1| | PREDICTED: uncharacterized protein LOC102449435 [Pelodiscus sinensis] | 4.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_594.1_14363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_594.1_14363.t1 atggctgaaggtggactatttgatttggacgtacagacaatcacgtcaaaatggaatgacacgattacacatttcgcaga gaagtactttcgtgtaattcttaagagagaaattgaccctgcaagattattacaatcaataaaccattctggttggaaac caaaatctcacgaaaaagaacaaattaatgaagtaacacgtcatggctataaagtccttgacgcatctgttctctacact ttaatacgaaacgttacaagattaagtttaccaagcagaggctggggaaaggaaccatcttataatcacgtgacagaatc cgatgacatcgaaagaatccgagcgctcagaaatgacgttattcacaagaaaaatctgtctcatttgttctacctcgagg cgttcaaaactttatcgagtattttagaacgggcgttgtcaagagctcctagtgttccatttcaagatgatttgaaatgc ctcaaagaattggtctctactttagaaaagtccactgcgccaagcaagccgaaggatggaggttctactgcaaactctat caatattagttgggttcaccgatcagatccaaacatagactatgttgctggatatgagatttattataagagagcatatg gatcagaccgtactaatagatggctccgtgtatgcaccaaggacagatgtccaaagtttaccataagaagactcaaatca cacactgaatatgtcttcaaagtgagagccttgtataatcaaggaggcaatgacactgcaggaccatttggtcaggaaag tgattgtatcaagacaaaagagaccccagccaataaaataaaacagctctgtaccaagctactagatacaatggacgacg gaagcagtatccagtaccacgaagtgttgttagaagaaaaggtggttaaaaacttcctacgaattaggagattagatcct caggttgacattggacagaattcttgcctggacagtaagacattattattagttgggacatcatcctcagagaaatctgc tgtcataaatgcagtcctcaatttcatgtatgatgtctcatttcacgacgagttcagacttctggttgatcgaggagaat ccgcgacatccggagcactttgcattagtcgatatgtctttcctcgacttcacggtgcaaagaccaaattctgtatcaac atcgtcgatataccttgcctgaccggtgacaagaagagggattcagaaattactcagcttgtgaaactttactacgatta ttgcaaagattcatcctcggaaaccattgacttaattgggtatgttatgccagagagtcacatgcaatctgttgaacctg gccaagagtatattttaggatgtgttcttgacatttttgggtcggacttgaagagcatcatacacataattcagacttct tcaagtccgaatgaaagtcaacgcagtcccgttgtcgaggcactgcatgatcatcatgtcttttgcagacagtttagatt caataatacatggttaagatctaataatgaagacattgcaaataattattgggaaatgagtgcacattcgtttcacgatc ttaatgtccatttacaaaaaactcgaccgaagacatttgtgcaatcggaagaagctctgaaaatgctcaacataatgaaa catatgttctggtcgtctcatcctttcttgcgatcatgtatcaacaaattaatcagcttaggtgaagagaagaagatgat gcaaaatttcgcggaagcaggagcgaatgttgtccctattcttgaatgttatgttgaagagtcatgggatgataataacg atagtttttgctttaattgtaccatttgcaaggtttcatgtttatacccatgctatgaagacagtactgacagtaatcat cttggaattaaaaacagaatcgacgaaacttgtcaaatgtgcggctgtcctttagctaaagacaacgaaagtagtcacac atttgaaaggaaattttatcgcttagagctgaagaaagagttgaaaaccttaggagaggttcaagaaaagtacaaaattg aggaaaccagaaatcttcatcagcatataacgaaacttaaaagtgatcatggagcttttctacatagactgatgcatgaa atagataagaaatttaaactctttcaggaaaagtcctcaagaagtcatgtagttccaattgaaaatgcgatagattgtct cgttcaggaagagcagtttgaaatctctgttggtactaatgagagaattcgcttgtactctatacttaaacgcaaagaaa tggtatcagattaa |
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Protein
| Protein ID | pfu_aug2.0_594.1_14363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_594.1_14363.t1 MAEGGLFDLDVQTITSKWNDTITHFAEKYFRVILKREIDPARLLQSINHSGWKPKSHEKEQINEVTRHGYKVLDASVLYT LIRNVTRLSLPSRGWGKEPSYNHVTESDDIERIRALRNDVIHKKNLSHLFYLEAFKTLSSILERALSRAPSVPFQDDLKC LKELVSTLEKSTAPSKPKDGGSTANSINISWVHRSDPNIDYVAGYEIYYKRAYGSDRTNRWLRVCTKDRCPKFTIRRLKS HTEYVFKVRALYNQGGNDTAGPFGQESDCIKTKETPANKIKQLCTKLLDTMDDGSSIQYHEVLLEEKVVKNFLRIRRLDP QVDIGQNSCLDSKTLLLVGTSSSEKSAVINAVLNFMYDVSFHDEFRLLVDRGESATSGALCISRYVFPRLHGAKTKFCIN IVDIPCLTGDKKRDSEITQLVKLYYDYCKDSSSETIDLIGYVMPESHMQSVEPGQEYILGCVLDIFGSDLKSIIHIIQTS SSPNESQRSPVVEALHDHHVFCRQFRFNNTWLRSNNEDIANNYWEMSAHSFHDLNVHLQKTRPKTFVQSEEALKMLNIMK HMFWSSHPFLRSCINKLISLGEEKKMMQNFAEAGANVVPILECYVEESWDDNNDSFCFNCTICKVSCLYPCYEDSTDSNH LGIKNRIDETCQMCGCPLAKDNESSHTFERKFYRLELKKELKTLGEVQEKYKIEETRNLHQHITKLKSDHGAFLHRLMHE IDKKFKLFQEKSSRSHVVPIENAIDCLVQEEQFEISVGTNERIRLYSILKRKEMVSD |
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