Gene
| Gene Model ID | pfu_aug2.0_5944.1_16157 |
|---|---|
| Locus | scaffold5944.1 : 15276 ... 22985 : + |
| To GenomeBrowser | scaffold5944.1:15276..22985 |
| Genes list of scaffold | scaffold5944.1 |
| Synonym | pfu_aug1.0_915.1_43849 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| angiopoietin-4 isoform x2 | GO:0044707 GO:0044763 GO:0048522 GO:0051239 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5944.1_16157.t1 | 1 | 1 | Fibrinogen_C | 70 | 197 | 2.4e-32 | 112.4 | 2.3e-36 | 3.4e-32 | 111.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5944.1_16157.t1 | gi|73992066|ref|XP_852012.1| | PREDICTED: angiopoietin-4 isoform X2 [Canis lupus familiaris] | 6.0e-26 |
| pfu_aug2.0_5944.1_16157.t1 | gi|671021628|ref|XP_008701631.1| | PREDICTED: angiopoietin-4 [Ursus maritimus] | 7.0e-26 |
| pfu_aug2.0_5944.1_16157.t1 | gi|260814476|ref|XP_002601941.1| | hypothetical protein BRAFLDRAFT_86425 [Branchiostoma floridae] | 7.0e-26 |
| pfu_aug2.0_5944.1_16157.t1 | gi|752423709|ref|XP_011230866.1| | PREDICTED: angiopoietin-4 [Ailuropoda melanoleuca] | 9.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_5944.1_16157.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5944.1_16157.t1 atgttacttttaggttgtcctacgctggaaacattacagaatcctgattgtgtaaacttatcagcctcaaacggagaata tataggtgactatgccagatataaagggtccaaaactagcggacaatttgttggaccgtttgcttaccgtaattgtagag atgatcaaacttggagtgacatcggcaacattgtttgtacccaagattcagattgtgaagatatccaattaacgtatacc atatcaggaatttatggtttacagagaccggagaaaacaacacttgtttattgtgatatggatttcggccttggtggctg gacggttattcaaagacgagaaactggacaagtcaacttcaaaagagtgtggaatgattacgtgaatggctttggagacg ttaatacagattactggatcgggaatgatattattcatggcatgacctacccctctggaaaaagagtgatattcctgatg gaagataaaaacgggaatgaacgtttttctgaatactcgactttcattgttgcgtcggagagagaaggatataaactaac aataagcggatacgtacatcgcagtggtgccgcag |
|
Protein
| Protein ID | pfu_aug2.0_5944.1_16157.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5944.1_16157.t1 MLLLGCPTLETLQNPDCVNLSASNGEYIGDYARYKGSKTSGQFVGPFAYRNCRDDQTWSDIGNIVCTQDSDCEDIQLTYT ISGIYGLQRPEKTTLVYCDMDFGLGGWTVIQRRETGQVNFKRVWNDYVNGFGDVNTDYWIGNDIIHGMTYPSGKRVIFLM EDKNGNERFSEYSTFIVASEREGYKLTISGYVHRSGAA |
|