Gene
| Gene Model ID | pfu_aug2.0_595.1_17625 |
|---|---|
| Locus | scaffold595.1 : 236360 ... 238539 : + |
| To GenomeBrowser | scaffold595.1:236360..238539 |
| Genes list of scaffold | scaffold595.1 |
| Synonym | pfu_aug1.0_322188.1_21687 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| trna pseudouridine synthase mitochondrial isoform x1 | GO:0009451 GO:0016853 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_595.1_17625.t1 | gi|498927431|ref|XP_004518139.1| | PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X2 [Ceratitis capitata] | 2.0e-14 |
| pfu_aug2.0_595.1_17625.t1 | gi|195391039|ref|XP_002054173.1| | GJ24293 [Drosophila virilis] | 6.0e-13 |
| pfu_aug2.0_595.1_17625.t1 | gi|675861530|ref|XP_009016325.1| | hypothetical protein HELRODRAFT_154673 [Helobdella robusta] | 1.0e-12 |
| pfu_aug2.0_595.1_17625.t1 | gi|632978632|ref|XP_007906022.1| | PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X1 [Callorhinchus milii] | 2.0e-12 |
| pfu_aug2.0_595.1_17625.t1 | gi|632978638|ref|XP_007906025.1| | PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X2 [Callorhinchus milii] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_595.1_17625.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_595.1_17625.t1 atgataactggatcagcaacagagaacggaagatacaacagaaaatggggaagagatggcgagcacaaccccattgaatg gtcaaaatacgaagaggaaatcttaaaattccaggacgaatacattctgccggatatttataaaacggaagcagaggaaa aagtcatgatgcaatggatgcagacgttagttcaccatgtgtttgactacactgaagacgatgaaggaaatgaaatatac ggacggaatagatttgaacagaagaaaaagggagatagtgcagatgacactgtagtacaagttgaaggagaaaaataa |
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Protein
| Protein ID | pfu_aug2.0_595.1_17625.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_595.1_17625.t1 MITGSATENGRYNRKWGRDGEHNPIEWSKYEEEILKFQDEYILPDIYKTEAEEKVMMQWMQTLVHHVFDYTEDDEGNEIY GRNRFEQKKKGDSADDTVVQVEGEK |
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