Gene
| Gene Model ID | pfu_aug2.0_596.1_20951 |
|---|---|
| Locus | scaffold596.1 : 7076 ... 33175 : - |
| To GenomeBrowser | scaffold596.1:7076..33175 |
| Genes list of scaffold | scaffold596.1 |
| Synonym | pfu_aug1.0_2998.1_59098 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox protein aristaless-like 4 | GO:0005488 GO:0035108 GO:0048513 GO:0048598 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_596.1_20951.t1 | 1 | 1 | Homeobox | 144 | 200 | 3.9e-24 | 84.0 | 1.7e-27 | 8.5e-24 | 82.9 |
| pfu_aug2.0_596.1_20951.t1 | 1 | 1 | OAR | 301 | 321 | 1.4e-06 | 27.5 | 5.4e-10 | 2.6e-06 | 26.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_596.1_20951.t1 | gi|260791952|ref|XP_002590991.1| | Q50 paired-like homeodomain transcription factor [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_596.1_20951.t1 | gi|260791956|ref|XP_002590993.1| | Q50 paired-like homeodomain transcription factor [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_596.1_20951.t1 | gi|115702398|ref|XP_785238.2| | PREDICTED: ALX homeobox protein 1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_596.1_20951.t1 | gi|704557586|ref|XP_010181695.1| | PREDICTED: homeobox protein aristaless-like 4, partial [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_596.1_20951.t1 | gi|675696104|ref|XP_008958550.1| | PREDICTED: homeobox protein aristaless-like 4 [Pan paniscus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_596.1_20951.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_596.1_20951.t1 atgttggatatggcctcagaggacttggaaaaactggaaaagatgtcagtgtattcggaatacctcggtatgtcagattc cttgaggacgcccttgggattagacttaaatataatgtccaatcctacccggtctacggacggaccccacggacaccggt cagacgtatttaacatgcattctatagagggaatcctcagtaccaggaccaaggacggtattgatagattctctaaagat gcggaccgtgaatacacagaaaaaacgccaaaacatgaggacactccaaatcataaatctgacgccaagttgacaccaaa gagggattcagagacgccagaacaccacataaagcttgaaagagaagaacaagaaggtgatatagtgaagaaagatgaga tgaatgacacgtcggaaaaggggaaaaaacgacgaaatcgaacaacatttacaagttttcaacttgaagaaatggaacgg attttccaaaagacgcattatccggacgtgtacgccagggaacagttggcgttacgatgtaaccttactgaggcaagagt acaggtttggtttcaaaacaggagggcaaaatggaggaaacgcgaacgatatggtcagcttcagacaatgcgggcaatga cagctggagcaaatccttacgacatccccctggggccaagacatgacgcgtattctcagtttcagcacaatccttgggcc acgtctcagcagattccttatacaatgcagaacacaaattgcatggcggcgcattctaatctaccaaatttcatgggact agctcatcacagtcatcttacgtcacattcggttggacctcaccaaacgacaatgtcacttccggtgtcacaatctcctc ccttggaccagtgtgagaacacggagaggaggagtactagtatagcctccttaaggctgagggcgcatgagcatagtatg gccatgggactcttcagtgcatatggaaaatga |
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Protein
| Protein ID | pfu_aug2.0_596.1_20951.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_596.1_20951.t1 MLDMASEDLEKLEKMSVYSEYLGMSDSLRTPLGLDLNIMSNPTRSTDGPHGHRSDVFNMHSIEGILSTRTKDGIDRFSKD ADREYTEKTPKHEDTPNHKSDAKLTPKRDSETPEHHIKLEREEQEGDIVKKDEMNDTSEKGKKRRNRTTFTSFQLEEMER IFQKTHYPDVYAREQLALRCNLTEARVQVWFQNRRAKWRKRERYGQLQTMRAMTAGANPYDIPLGPRHDAYSQFQHNPWA TSQQIPYTMQNTNCMAAHSNLPNFMGLAHHSHLTSHSVGPHQTTMSLPVSQSPPLDQCENTERRSTSIASLRLRAHEHSM AMGLFSAYGK |
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